cyoB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''cyoB''  
''cyoB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0425, b0431, JW0421''<ref name='LIB:Riley_2006'/>
''ECK0425, b0431, JW0421''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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cytochrome <i>bo</i> terminal oxidase subunit I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
cytochrome <i>bo</i> terminal oxidase subunit I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Cytochrome o oxidase subunit I; cytochrome bo(3) ubiquinol oxidase subunit I<ref name='LIB:EcoGene'/>
Cytochrome o oxidase subunit I; cytochrome bo(3) ubiquinol oxidase subunit I<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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cytochrome o ubiquinol oxidase subunit I<ref name='LIB:Riley_2006'/>, B0431<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CyoB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
cytochrome o ubiquinol oxidase subunit I<ref name='LIB:Riley_2006'/>, B0431<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CyoB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005507 copper ion binding ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0009055 electron carrier activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0009486 cytochrome bo3 ubiquinol oxidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0015453 oxidoreduction-driven active transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0020037 heme binding ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0046872 metal ion binding ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Cellular Component'''
* GO:0005887 integral to plasma membrane ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cyoABCDE|cyoABCDE]]<ref name='LIB:EcoCyc10.6'/>, OP00141  
transcription unit(s): [[:Category:Txn_unit:cyoABCDE|cyoABCDE]]<ref name='LIB:EcoCyc10.6'/>, OP00141  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=cyoB&loc=MG1655:449865..447874,W3110:449865..447874,DH10B:389196..387205,REL606:421344..419353 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=421344&end=419353&gene=cyoB&aa=mfgklsldavpfhepivmvtiagiilgglalvglityfgkwtylwkewltsvdhkrlgimyiivaivmllrgfadaimmrsqqalasageagflpphhydqiftahgvimiffvampfviglmnlvvplqigardvafpflnnlsfwftvvgvilvnvslgvgefaqtgwlaypplsgieyspgvgvdywiwslqlsgigttltginffvtilkmrapgmtmfkmpvftwaslcanvliiasfpiltvtvalltldrylgthfftndmggnmmmyinliwawghpevyililpvfgvfseiaatfsrkrlfgytslvwatvcitvlsfivwlhhfftmgaganvnaffgittmiiaiptgvkifnwlftmyqgrivfhsamlwtigfivtfsvggmtgvllavpgadfvlhnslfliahfhnviiggvvfgcfagmtywwpkafgfklnetwgkrafwfwiigffvafmplyalgfmgmtrrlsqqidpqfhtmlmiaasgavlialgilclviqmyvsirdrdqnrdltgdpwggrtlewatsspppfynfavvphvherdafwemkekgeaykkpdhyeeihmpknsgagiviaafstifgfamiwhiwwlaivgfagmiitwivksfdedvdyyvpvaeieklenqhfdeitkaglkngn Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cyoB+AND+escherichia+coli Pubmed(cyoB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cyoB Textpresso(cyoB)]


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Revision as of 00:05, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

cyoB

Gene Synonym(s)

ECK0425, b0431, JW0421[1]

Product Desc.

cytochrome bo terminal oxidase subunit I[2][3];

Component of cytochrome bo terminal oxidase[2][3]

Cytochrome o oxidase subunit I; cytochrome bo(3) ubiquinol oxidase subunit I[4]

Product Synonyms(s)

cytochrome o ubiquinol oxidase subunit I[1], B0431[2][1], CyoB[2][1]

Function from GO

Molecular Function

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cyoABCDE[2], OP00141

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(cyoB)    Textpresso(cyoB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Cytochrome bo undergoes redox-linked structrual alterations.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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