degS:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''degS'' | ''degS'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3224, b3235, JW3204, hhoB, htrH''<ref name='LIB:Riley_2006'/> | ''ECK3224, b3235, JW3204, hhoB, htrH''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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inner membrane serine protease required for the extracytoplasmic stress response mediated by sigmaE<ref name='LIB:EcoCyc10.6'/>; serine endoprotease, periplasmic<ref name='LIB:EcoCyc11.1'/> | inner membrane serine protease required for the extracytoplasmic stress response mediated by sigmaE<ref name='LIB:EcoCyc10.6'/>; serine endoprotease, periplasmic<ref name='LIB:EcoCyc11.1'/> | ||
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Serine protease, degrades periplasmic RseA, activating RpoE; multicopy suppressor of prc; periplasmic stress sensor for unfolded or misfolded OMPs<ref name='LIB:EcoGene'/> | Serine protease, degrades periplasmic RseA, activating RpoE; multicopy suppressor of prc; periplasmic stress sensor for unfolded or misfolded OMPs<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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serine endoprotease, periplasmic<ref name='LIB:Riley_2006'/>, B3235<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtrH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HhoB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DegS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | serine endoprotease, periplasmic<ref name='LIB:Riley_2006'/>, B3235<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtrH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HhoB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DegS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:degQ|degQ]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:degQ|degQ]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=degS&loc=MG1655:3380222..3381289,W3110:3382055..3383122,REL606:3310098..3311165,DH10B:3477967..3479034 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3477967&end=3479034&gene=degS&aa=mfvkllrsvaiglivgaillvampslrslnplstpqfdstdetpasynlavrraapavvnvynrglntnshnqleirtlgsgvimdqrgyiitnkhvindadqiivalqdgrvfeallvgsdsltdlavlkinatgglptipinarrvphigdvvlaignpynlgqtitqgiisatgriglnptgrqnflqtdasinhgnsggalvnslgelmgintlsfdksndgetpegigfaipfqlatkimdklirdgrvirgyigiggreiaplhaqgggidqlqgivvnevspdgpaanagiqvndliisvdnkpaisaletmdqvaeirpgsvipvvvmrddkqltlqvtiqeypatn Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=degS+AND+escherichia+coli Pubmed(degS)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=degS Textpresso(degS)] | |||
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Revision as of 00:04, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
degS |
|---|---|
| Gene Synonym(s) |
ECK3224, b3235, JW3204, hhoB, htrH[1] |
| Product Desc. |
inner membrane serine protease required for the extracytoplasmic stress response mediated by sigmaE[2]; serine endoprotease, periplasmic[3] Serine protease, degrades periplasmic RseA, activating RpoE; multicopy suppressor of prc; periplasmic stress sensor for unfolded or misfolded OMPs[4] |
| Product Synonyms(s) |
serine endoprotease, periplasmic[1], B3235[2][1], HtrH[2][1], HhoB[2][1], DegS[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
degS is an essential gene. DegS may be anchored to the inner membrane. Mutants have elevated OM vesiculation (McBroom, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.