elbB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''elbB'' | ''elbB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3198, b3209, JW3176, elb2, yhbL, yzzB, s27a''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK3198, b3209, JW3176, elb2, yhbL, yzzB, s27a''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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isoprenoid biosynthesis protein<ref name='LIB:EcoCyc10.6'/>; isoprenoid biosynthesis protein with amidotransferase-like domain<ref name='LIB:EcoCyc11.1'/> | isoprenoid biosynthesis protein<ref name='LIB:EcoCyc10.6'/>; isoprenoid biosynthesis protein with amidotransferase-like domain<ref name='LIB:EcoCyc11.1'/> | ||
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Involved in isoprenoid biosynthesis; also known as sigma cross-reacting protein 27A<ref name='LIB:EcoGene'/> | Involved in isoprenoid biosynthesis; also known as sigma cross-reacting protein 27A<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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isoprenoid biosynthesis protein with amidotransferase-like domain<ref name='LIB:Riley_2006'/>, B3209<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzzB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ElbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sigma cross-reacting protein 27A (SCRP-27A)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | isoprenoid biosynthesis protein with amidotransferase-like domain<ref name='LIB:Riley_2006'/>, B3209<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzzB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ElbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sigma cross-reacting protein 27A (SCRP-27A)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Cellular Component''' | |||
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0045828 positive regulation of isoprenoid metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0008299 isoprenoid biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:mtgA|mtgA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:mtgA|mtgA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=elbB&loc=MG1655:3348481..3347828,W3110:3350314..3349661,DH10B:3446226..3445573,REL606:3285041..3285694 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3285041&end=3285694&gene=elbB&aa=mitmkkigvilsgcgvydgseiheavltllaisrsgaqavcfapdkqqvdvinhltgeamtetrnvlieaaritrgeirplaqadaaeldalivpggfgaaknlsnfaslgsectvdrelkalaqamhqagkplgfmciapamlpkifdfplrltigtdidtaevleemgaehvpcpvddivvdednkivttpaymlaqniaeaasgidklvsrvlvlae Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=elbB+AND+escherichia+coli Pubmed(elbB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=elbB Textpresso(elbB)] | |||
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Revision as of 00:02, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
elbB |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
isoprenoid biosynthesis protein[2]; isoprenoid biosynthesis protein with amidotransferase-like domain[3] Involved in isoprenoid biosynthesis; also known as sigma cross-reacting protein 27A[4] |
| Product Synonyms(s) |
isoprenoid biosynthesis protein with amidotransferase-like domain[1], B3209[2][1], YzzB[2][1], ElbB[2][1], YhbL[2][1], sigma cross-reacting protein 27A (SCRP-27A)[2][1] |
| Function from GO |
Molecular Function
Cellular Component
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Variously called C56 peptidase family, PfpI/HchA peptidase/chaperone family, DJ-1/PARK7 superfamily. Sigma cross-reaction is unconfirmed.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.