fadJ:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''fadJ''  
''fadJ''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yfcX, ECK2335, b2341, JW2338''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yfcX, ECK2335, b2341, JW2338''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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FadJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
FadJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Multifunctional anaerobic fatty acid oxidation complex FadIJ; has 3-hydroxyacyl-CoA dehydrogenase and medium-long-chain-length enoyl-CoA hydratase activities; probable beta-hydroxybutyryl-CoA epimerase and dodecenoyl-CoA-delta-isomerase<ref name='LIB:EcoGene'/>
Multifunctional anaerobic fatty acid oxidation complex FadIJ; has 3-hydroxyacyl-CoA dehydrogenase and medium-long-chain-length enoyl-CoA hydratase activities; probable beta-hydroxybutyryl-CoA epimerase and dodecenoyl-CoA-delta-isomerase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fused enoyl-CoA hydratase and epimerase and isomerase<ref name='LIB:Riley_2006'/>, 3-hydroxyacyl-CoA dehydrogenase<ref name='LIB:Riley_2006'/>, B2341<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FadJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfcX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
fused enoyl-CoA hydratase and epimerase and isomerase<ref name='LIB:Riley_2006'/>, 3-hydroxyacyl-CoA dehydrogenase<ref name='LIB:Riley_2006'/>, B2341<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FadJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfcX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:fadIJ|fadIJ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:fadIJ|fadIJ]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=fadJ&loc=MG1655:2457181..2455037,W3110:2464605..2462461,DH10B:2548946..2546802,REL606:2400679..2402823 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2400679&end=2402823&gene=fadJ&aa=memtsaftlnvrldniavitidvpgekmntlkaefasqvraiikqlrenkelrgvvfvsakpdnfiagadinmigncktaqeaealarqgqqlmaeihalpiqviaaihgaclggglelalachgrvctddpktvlglpevqlgllpgsggtqrlprligvstalemiltgkqlrakqalklglvddvvphsilleaavelakkerpssrplpvrerilagplgrallfkmvgkktehktqgnypaterilevvetglaqgtssgydaearafgelamtpqsqalrsiffastdvkkdpgsdappaplnsvgilggglmgggiayvtackagipvrikdinpqginhalkyswdqlegkvrrrhlkaserdkqlalisgttdyrgfahrdliieavfenlelkqqmvaeveqncaahtifasntsslpigdiaahatrpeqviglhffspvekmplveiiphagtsaqtiattvklakkqgktpivvrdkagfyvnrilapyineairmltqgervehidaalvkfgfpvgpiqlldevgidtgtkiipvleaaygerfsapanvvssilnddrkgrkngrgfylygqkgrkskkqvdpaiypligtqgqgrisapqvaercvmlmlneavrcvdeqvirsvrdgdigavfgigfppflggpfryidslgagevvaimqrlatqygsrftpcerlvemgargesfwkttatdlq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fadJ+AND+escherichia+coli Pubmed(fadJ)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fadJ Textpresso(fadJ)]


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Revision as of 00:01, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

fadJ

Gene Synonym(s)

yfcX, ECK2335, b2341, JW2338[1][2]

Product Desc.

FadJ[2][3];

Component of fatty acid oxidation complex[3]

Multifunctional anaerobic fatty acid oxidation complex FadIJ; has 3-hydroxyacyl-CoA dehydrogenase and medium-long-chain-length enoyl-CoA hydratase activities; probable beta-hydroxybutyryl-CoA epimerase and dodecenoyl-CoA-delta-isomerase[4]

Product Synonyms(s)

fused enoyl-CoA hydratase and epimerase and isomerase[1], 3-hydroxyacyl-CoA dehydrogenase[1], B2341[2][1], FadJ[2][1], YfcX[2][1]

Function from GO

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fadIJ[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(fadJ)    Textpresso(fadJ)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Also known as beta-oxidation complex II. FadR regulon. FadIJ are in a high MW complex. FadAB and FadIJ are paralogs.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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