fixC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''fixC'' | ''fixC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0044, b0043, JW0042, yaaS''<ref name='LIB:Riley_2006'/> | ''ECK0044, b0043, JW0042, yaaS''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Related to carnitine metabolism; similarity to Rhizobium fix gene<ref name='LIB:EcoGene'/> | Related to carnitine metabolism; similarity to Rhizobium fix gene<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted oxidoreductase with FAD/NAD(P)-binding domain<ref name='LIB:Riley_2006'/>, B0043<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FixC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted oxidoreductase with FAD/NAD(P)-binding domain<ref name='LIB:Riley_2006'/>, B0043<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FixC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0050660 FAD binding ([http://www.geneontology.org/GO.evidence.shtml ISA]) | |||
* GO:0051536 iron-sulfur cluster binding ([http://www.geneontology.org/GO.evidence.shtml ISA]) | |||
* GO:0004174 electron-transferring-flavoprotein dehydrogenase activity ([http://www.geneontology.org/GO.evidence.shtml ISA]) | |||
'''Biological Process''' | |||
* GO:0009437 carnitine metabolic process ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:fixABCX|fixABCX]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:fixABCX|fixABCX]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=fixC&loc=MG1655:44180..45466,W3110:44180..45466,DH10B:44180..45466,REL606:48375..49661 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=48375&end=49661&gene=fixC&aa=msedifdaiivgaglagsvaalvlaregaqvlviergnsagaknvtggrlyahslehiipgfadsapverlitheklafmteksamtmdycngdetspsqrsysvlrskfdawlmeqaeeagaqlitgirvdnlvqrdgkvvgveadgdvieaktviladgvnsilaeklgmakrvkptdvavgvkelielpksviedrfqlqgnqgaaclfagsptdglmgggflytnentlslglvcglhhlhdakksvpqmledfkqhpavapliaggklveysahvvpeaginmlpelvgdgvliagdaagmcmnlgftirgmdlaiaageaaaktvlsamksddfskqklaeyrqhlesgplrdmrmyqklpafldnprmfsgypelavgvardlftidgsapelmrkkilrhgkkvgfinlikdgmkgvtvl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fixC+AND+escherichia+coli Pubmed(fixC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fixC Textpresso(fixC)] | |||
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Revision as of 23:59, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
fixC |
|---|---|
| Gene Synonym(s) |
ECK0044, b0043, JW0042, yaaS[1] |
| Product Desc. |
flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism[2][3] Related to carnitine metabolism; similarity to Rhizobium fix gene[4] |
| Product Synonyms(s) |
predicted oxidoreductase with FAD/NAD(P)-binding domain[1], B0043[2][1], YaaS[2][1], FixC[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.