gabT:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''gabT'' | ''gabT'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK2656, b2662, JW2637''<ref name='LIB:Riley_2006'/> | ''ECK2656, b2662, JW2637''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
4-aminobutyrate aminotransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | 4-aminobutyrate aminotransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
4-aminobutyrate aminotransferase<ref name='LIB:EcoGene'/> | 4-aminobutyrate aminotransferase<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
4-aminobutyrate aminotransferase, PLP-dependent<ref name='LIB:Riley_2006'/>, B2662<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GabT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 4-aminobutyrate aminotransferase, PLP-dependent<ref name='LIB:Riley_2006'/>, B2662<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GabT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Molecular Function''' | |||
* GO:0003867 4-aminobutyrate transaminase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0030170 pyridoxal phosphate binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0009450 gamma-aminobutyric acid catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:gabDTP|gabDTP]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:csiD-ygaF-gabDTP|csiD-ygaF-gabDTP]]<ref name='LIB:EcoCyc10.6'/>, csiD | transcription unit(s): [[:Category:Txn_unit:gabDTP|gabDTP]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:csiD-ygaF-gabDTP|csiD-ygaF-gabDTP]]<ref name='LIB:EcoCyc10.6'/>, csiD | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=gabT&loc=MG1655:2790757..2792037,W3110:2791391..2792671,REL606:2687415..2688695,DH10B:2882522..2883802 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2882522&end=2883802&gene=gabT&aa=mnsnkelmqrrsqaiprgvgqihpifadraencrvwdvegreyldfaggiavlntghlhpkvvaaveaqlkklshtcfqvlayepylelceimnqkvpgdfakktllvttgseavenavkiaraatkrsgtiafsgayhgrthytlaltgkvnpysagmglmpghvyralypcplhgiseddaiasihrifkndaapediaaiviepvqgeggfyasspafmqrlralcdehgimliadevqsgagrtgtlfameqmgvapdlttfaksiaggfplagvtgraevmdavapgglggtyagnpiacvaalevlkvfeqenllqkandlgqklkdgllaiaekhpeigdvrglgamiaielfedgdhnkpdakltaeivarardkglillscgpyynvlrilvpltiedaqirqgleiisqcfdeakq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gabT+AND+escherichia+coli Pubmed(gabT)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gabT Textpresso(gabT)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:57, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gabT |
|---|---|
| Gene Synonym(s) |
ECK2656, b2662, JW2637[1] |
| Product Desc. |
4-aminobutyrate aminotransferase[2][3]; Component of 4-aminobutyrate transaminase[2][3] 4-aminobutyrate aminotransferase[4] |
| Product Synonyms(s) |
4-aminobutyrate aminotransferase, PLP-dependent[1], B2662[2][1], GabT[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): gabDTP[2], csiD-ygaF-gabDTP[2], csiD |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.