gatD:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''gatD''  
''gatD''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2084, b2091, JW2075''<ref name='LIB:Riley_2006'/>
''ECK2084, b2091, JW2075''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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Galactitol-1-phosphate dehydrogenase<ref name='LIB:EcoGene'/>
Galactitol-1-phosphate dehydrogenase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding<ref name='LIB:Riley_2006'/>, B2091<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GatD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding<ref name='LIB:Riley_2006'/>, B2091<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GatD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0019404 galactitol catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gatYZABCD|gatYZABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00231  
transcription unit(s): [[:Category:Txn_unit:gatYZABCD|gatYZABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00231  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=gatD&loc=MG1655:2170897..2169857,W3110:2175010..2173970,DH10B:2261905..2260865,REL606:2126235..2125195 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2126235&end=2125195&gene=gatD&aa=mksvvndtdgivrvaesvipeikhqdevrvkiassglcgsdlprifkngahyypitlghefsgyidavgsgvddlhpgdavacvpllpcftcpeclkgfysqcakydfigsrrdggfaeyivvkrknvfalptdmpiedgafiepitvglhafhlaqgcenknviiigagtigllaiqcavalgaksvtaidisseklalaksfgamqtfnssemsapqmqsvlrelrfnqliletagvpqtvelaveiagphaqlalvgtlhqdlhltsatfgkilrkeltvigswmnysspwpgqewetasrllterklslepliahrgsfesfaqavrdiarnampgkvllip Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gatD+AND+escherichia+coli Pubmed(gatD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gatD Textpresso(gatD)]


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Revision as of 23:56, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

gatD

Gene Synonym(s)

ECK2084, b2091, JW2075[1]

Product Desc.

Galactitol-1-phosphate dehydrogenase[2]

Product Synonyms(s)

galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding[1], B2091[3][1], GatD[3][1]

Function from GO

Molecular Function

  • GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (IDA)

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gatYZABCD[3], OP00231

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(gatD)    Textpresso(gatD)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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