gltD:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''gltD''  
''gltD''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3203, b3213, JW3180, aspB, ossB, psiQ''<ref name='LIB:Riley_2006'/>
''ECK3203, b3213, JW3180, aspB, ossB, psiQ''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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glutamate synthase (NADPH) small chain<ref name='LIB:EcoCyc10.6'/>; glutamate synthase, small subunit<ref name='LIB:EcoCyc11.1'/>;  
glutamate synthase (NADPH) small chain<ref name='LIB:EcoCyc10.6'/>; glutamate synthase, small subunit<ref name='LIB:EcoCyc11.1'/>;  
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Glutamate synthase, small subunit<ref name='LIB:EcoGene'/>
Glutamate synthase, small subunit<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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glutamate synthase, 4Fe-4S protein, small subunit<ref name='LIB:Riley_2006'/>, B3213<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OssB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PsiQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AspB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
glutamate synthase, 4Fe-4S protein, small subunit<ref name='LIB:Riley_2006'/>, B3213<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OssB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PsiQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AspB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0004355 glutamate synthase (NADPH) activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
'''Biological Process'''
* GO:0006537 glutamate biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0006807 nitrogen compound metabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gltBDF|gltBDF]]<ref name='LIB:EcoCyc10.6'/>, OP00253, gltD  
transcription unit(s): [[:Category:Txn_unit:gltBDF|gltBDF]]<ref name='LIB:EcoCyc10.6'/>, OP00253, gltD  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=gltD&loc=MG1655:3357220..3358638,W3110:3359053..3360471,REL606:3294433..3295851,DH10B:3454965..3456383 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3454965&end=3456383&gene=gltD&aa=msqnvyqfidlqrvdppkkplkirkiefveiyepfsegqakaqadrclscgnpycewkcpvhnyipnwlklanegrifeaaelshqtntlpevcgrvcpqdrlcegsctlndefgavtignieryindkafemgwrpdmsgvkqtgkkvaiigagpaglacadvltrngvkavvfdrhpeigglltfgipafklekevmtrrreiftgmgiefklntevgrdvqlddllsdydavflgvgtyqsmrgglenedadgvyaalpfliantkqlmgfgetrdepfvsmegkrvvvlgggdtamdcvrtsvrqgakhvtcayrrdeenmpgsrrevknareegvefkfnvqplgievngngkvsgvkmvrtemgepdakgrrraeivagsehivpadavimafgfrphnmewlakhsveldsqgriiapegsdnafqtsnpkifaggdivrgsdlvvtaiaegrkaadgimnwlev Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gltD+AND+escherichia+coli Pubmed(gltD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gltD Textpresso(gltD)]


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Revision as of 23:55, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

gltD

Gene Synonym(s)

ECK3203, b3213, JW3180, aspB, ossB, psiQ[1]

Product Desc.

glutamate synthase (NADPH) small chain[2]; glutamate synthase, small subunit[3];

Component of glutamate synthase[2][3]; glutamate synthase (NADPH)[2]

Glutamate synthase, small subunit[4]

Product Synonyms(s)

glutamate synthase, 4Fe-4S protein, small subunit[1], B3213[2][1], OssB[2][1], PsiQ[2][1], AspB[2][1], GltD[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gltBDF[2], OP00253, gltD

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(gltD)    Textpresso(gltD)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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