gltX:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''gltX'' | ''gltX'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2394, b2400, JW2395, gltM, gluRS, G259''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK2394, b2400, JW2395, gltM, gluRS, G259''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Glutamate--tRNA ligase<ref name='LIB:EcoGene'/> | Glutamate--tRNA ligase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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glutamyl-tRNA synthetase<ref name='LIB:Riley_2006'/>, B2400<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | glutamyl-tRNA synthetase<ref name='LIB:Riley_2006'/>, B2400<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:gltX|gltX]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:gltX|gltX]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=gltX&loc=MG1655:2518694..2517279,W3110:2526118..2524703,DH10B:2610459..2609044,REL606:2453548..2452133 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2453548&end=2452133&gene=gltX&aa=mkiktrfapsptgylhvggartalyswlfarnhggefvlriedtdlerstpeaieaimdgmnwlslewdegpyyqtkrfdrynavidqmleegtaykcycskerlealreeqmakgekprydgrcrhshehhaddepcvvrfanpqegsvvfddqirgpiefsnqelddliirrtdgsptynfcvvvddwdmeithvirgedhinntprqinilkalkapvpvyahvsmingddgkklskrhgavsvmqyrddgylpeallnylvrlgwshgdqeiftreemikyftlnavsksasafntdkllwlnhhyinalppeyvathlqwhieqenidtrngpqladlvkllgercktlkemaqscryfyedfaefdadaakkhlrpvarqplevvrdklaaitdwtaenvhhaiqatadelevgmgkvgmplrvavtgagqspaldvtvhaigktrsierinkaldfiaerenqq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gltX+AND+escherichia+coli Pubmed(gltX)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gltX Textpresso(gltX)] | |||
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Revision as of 23:55, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gltX |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Glutamate--tRNA ligase[3] |
| Product Synonyms(s) |
glutamyl-tRNA synthetase[1], B2400[2][1], GltM[2][1], GltX[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The zinc binding motif Cys98-x-Cys100-x(24)-Cys125-x-H127 of GltX categorizes this as a SWIM domain (standard C-x-C-x(n)-C-x-H with n=6-25). Mutation analysis (C100Y) indicates SWIM plays a minimal role in overall binding of tRNA, but an increased role in orientation of the acceptor 3?-terminal adenosine.[3]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.