mrr:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''mrr'' | ''mrr'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4341, b4351, JW4314, mcrF''<ref name='LIB:Riley_2006'/> | ''ECK4341, b4351, JW4314, mcrF''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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restriction of methylated adenine<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | restriction of methylated adenine<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Restriction of DNA with certain methylated adenine or cytosine residues<ref name='LIB:EcoGene'/> | Restriction of DNA with certain methylated adenine or cytosine residues<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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methylated adenine and cytosine restriction protein product<ref name='LIB:Riley_2006'/>, B4351 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Mrr product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | methylated adenine and cytosine restriction protein product<ref name='LIB:Riley_2006'/>, B4351 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Mrr product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:mrr|mrr]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:mrr|mrr]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=mrr&loc=MG1655:4584972..4585886,W3110:4591629..4592543,REL606:4564924..4565838 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4564924&end=4565838&gene=mrr&aa=mtvptydkfiepvlrylatkpegaaardvheaaadalglddsqrakvitsgqlvyknragwahdrlkraglsqslsrgkwcltpagfdwvashpqpmteqetnhlafafvnvklksrpdavdldpkadspdheelaksspddrldqalkelrdavadevlenllqvspsrfevivldvlhrlgygghrddlqrvggtgdggidgvisldklglekvyvqakrwqntvgrpelqafygalagqkakrgvfittsgftsqardfaqsvegmvlvdgerlvhlmienevgvssrllkvpkldmdyfe Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mrr+AND+escherichia+coli Pubmed(mrr)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=mrr Textpresso(mrr)] | |||
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Revision as of 23:42, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
mrr |
|---|---|
| Gene Synonym(s) |
ECK4341, b4351, JW4314, mcrF[1] |
| Product Desc. |
restriction of methylated adenine[2][3] Restriction of DNA with certain methylated adenine or cytosine residues[4] |
| Product Synonyms(s) |
methylated adenine and cytosine restriction protein product[1], B4351 product[2][1], Mrr product[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The N-terminus of overexpressed Mrr was determined, but the native RBS was not used. The initial Met was not clipped. although unVerified, this start is almost certainly correct. Mrr is normally cryptic, but is activated by high pressure stress, which leads to a recB-dependent SOS pathway activation.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.