napH:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''napH'' | ''napH'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2196, b2204, JW2192, yejZ''<ref name='LIB:Riley_2006'/> | ''ECK2196, b2204, JW2192, yejZ''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ferredoxin-type protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ferredoxin-type protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Quinol dehydrogenase, membrane protein; polyferredoxin; mediates electron transfer from ubiquinol/naphthoquinone to NapAB, via NapC; non-haem, iron-sulphur protein<ref name='LIB:EcoGene'/> | Quinol dehydrogenase, membrane protein; polyferredoxin; mediates electron transfer from ubiquinol/naphthoquinone to NapAB, via NapC; non-haem, iron-sulphur protein<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)<ref name='LIB:Riley_2006'/>, B2204<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YejZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NapH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)<ref name='LIB:Riley_2006'/>, B2204<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YejZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NapH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Cellular Component''' | |||
* GO:0016020 membrane ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:napFDAGHBC|napFDAGHBC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:napFDAGHBC-ccmABCDEFGH|napFDAGHBC-ccmABCDEFGH]]<ref name='LIB:EcoCyc10.6'/>, aeg-46.5 | transcription unit(s): [[:Category:Txn_unit:napFDAGHBC|napFDAGHBC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:napFDAGHBC-ccmABCDEFGH|napFDAGHBC-ccmABCDEFGH]]<ref name='LIB:EcoCyc10.6'/>, aeg-46.5 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=napH&loc=MG1655:2297600..2296737,W3110:2302912..2302049,REL606:2249567..2248704,DH10B:2388588..2387725 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2388588&end=2387725&gene=napH&aa=manrkrdagrealekkgwwrshrwlvlrrlcqffvlgmflsgpwfgvwilhgnysssllfdtvpltdplmtlqslasghlpatvaltgaviitvlyalagkrlfcswvcplnpitdlanwlrrrfdlnqsatiprhiryvllvvilvgsaltgtliwewinpvslmgrslvmgfgsgallilalflfdllvvehgwcghicpvgalygvlgskgvitvaatdrqkcnrcmdcfhvcpephvlrapvldeqspvqvtsrdcmtcgrcvdvcsedvftittrwssgaks Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=napH+AND+escherichia+coli Pubmed(napH)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=napH Textpresso(napH)] | |||
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Revision as of 23:40, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
napH |
|---|---|
| Gene Synonym(s) |
ECK2196, b2204, JW2192, yejZ[1] |
| Product Desc. |
ferredoxin-type protein[2][3]; Component of NapGH, alternative quinol dehydrogenase[3]; periplasmic nitrate reductase[2][3] Quinol dehydrogenase, membrane protein; polyferredoxin; mediates electron transfer from ubiquinol/naphthoquinone to NapAB, via NapC; non-haem, iron-sulphur protein[4] |
| Product Synonyms(s) |
ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)[1], B2204[2][1], YejZ[2][1], NapH[2][1] |
| Function from GO |
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): napFDAGHBC[2], napFDAGHBC-ccmABCDEFGH[2], aeg-46.5 |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
NapH is a four TM helix membrane protein, N- and C-in, with cytoplasmic C-terminal iron-sulfur cluster domain, using fusions and Westerns blots (Brondijk, 2002). NapH not required for menaquinol transfer (Brondijk, 2002). napH and yccM are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.