nikR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''nikR'' | ''nikR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3465, b3481, JW3446, yhhG''<ref name='LIB:Riley_2006'/> | ''ECK3465, b3481, JW3446, yhhG''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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NikR<ref name='LIB:EcoCyc10.6'/>; DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:EcoCyc11.1'/> | NikR<ref name='LIB:EcoCyc10.6'/>; DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:EcoCyc11.1'/> | ||
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Nickel-responsive regulator of the nik operon; homodimer<ref name='LIB:EcoGene'/> | Nickel-responsive regulator of the nik operon; homodimer<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:Riley_2006'/>, B3481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, nickel-responsive transcriptional regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NikR<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:Riley_2006'/>, B3481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, nickel-responsive transcriptional regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NikR<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:nikABCDER|nikABCDER]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nikR|nikR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:nikABCDER|nikABCDER]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nikR|nikR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=nikR&loc=MG1655:3616611..3617012,W3110:4021827..4021426,REL606:3549276..3549677,DH10B:3714356..3714757 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3714356&end=3714757&gene=nikR&aa=mqrvtitldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpked Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nikR+AND+escherichia+coli Pubmed(nikR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nikR Textpresso(nikR)] | |||
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Revision as of 23:39, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
nikR |
|---|---|
| Gene Synonym(s) |
ECK3465, b3481, JW3446, yhhG[1] |
| Product Desc. |
NikR[2]; DNA-binding transcriptional repressor, Ni-binding[3] Nickel-responsive regulator of the nik operon; homodimer[4] |
| Product Synonyms(s) |
DNA-binding transcriptional repressor, Ni-binding[1], B3481[2][1], YhhG[2][1], nickel-responsive transcriptional regulator[2][1], NikR[3][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ACT-like domain (Grant, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.