nrfG:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''nrfG'' | ''nrfG'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4069, b4076, JW4037, aidC, yjcN''<ref name='LIB:Riley_2006'/> | ''ECK4069, b4076, JW4037, aidC, yjcN''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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NrfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | NrfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Required for NrfA maturation; binds NrfA; NrfEFG heme lyase complex; formate-dependent nitrite reduction<ref name='LIB:EcoGene'/> | Required for NrfA maturation; binds NrfA; NrfEFG heme lyase complex; formate-dependent nitrite reduction<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG<ref name='LIB:Riley_2006'/>, B4076<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AidC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG<ref name='LIB:Riley_2006'/>, B4076<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AidC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:nrfABCDEFG|nrfABCDEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00279, nrf | transcription unit(s): [[:Category:Txn_unit:nrfABCDEFG|nrfABCDEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00279, nrf | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=nrfG&loc=MG1655:4291566..4292162,W3110:4297133..4297729,REL606:4272476..4273072,DH10B:4392039..4392635 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4392039&end=4392635&gene=nrfG&aa=mkqpkipvkmlttltilmvflcvgsyllspkwqavraeyqrqrdplhqfasqqtpeaqlqalqdkiranpqnseqwallgeyylwqndysnsllayrqalqlrgenaelyaalatvlyyqasqhmtaqtramidkalaldsneitalmllasdafmqanyaqaielwqkvmdlnsprvnrtqlvesinmakllqrrld Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nrfG+AND+escherichia+coli Pubmed(nrfG)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nrfG Textpresso(nrfG)] | |||
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Revision as of 23:38, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
nrfG |
|---|---|
| Gene Synonym(s) |
ECK4069, b4076, JW4037, aidC, yjcN[1] |
| Product Desc. |
Required for NrfA maturation; binds NrfA; NrfEFG heme lyase complex; formate-dependent nitrite reduction[4] |
| Product Synonyms(s) |
heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG[1], B4076[2][1], AidC[2][1], YjcN[2][1], NrfG[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): nrfABCDEFG[2], OP00279, nrf |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
False positive lipoprotein prediction, Cys not conserved. TPR domain. The crystal structure 2E2E is derived from strain O157:H7, and differs at two positions from K-12, T54N and L197S.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.