paaF:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''paaF'' | ''paaF'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1390, b1393, JW1388, ydbS, ydbR''<ref name='LIB:Riley_2006'/> | ''ECK1390, b1393, JW1388, ydbS, ydbR''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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putative enoyl-CoA hydratase/isomerase of phenylacetate degradation<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | putative enoyl-CoA hydratase/isomerase of phenylacetate degradation<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Phenylacetic acid degradation; mutants are unable to use phenylacetate as a carbon source<ref name='LIB:EcoGene'/> | Phenylacetic acid degradation; mutants are unable to use phenylacetate as a carbon source<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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enoyl-CoA hydratase-isomerase<ref name='LIB:Riley_2006'/>, B1393<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdbR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdbS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PaaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | enoyl-CoA hydratase-isomerase<ref name='LIB:Riley_2006'/>, B1393<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdbR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdbS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PaaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:paaABCDEFGHIJK|paaABCDEFGHIJK]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:paaABCDEFGHIJK|paaABCDEFGHIJK]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=paaF&loc=MG1655:1455521..1456288,W3110:1459211..1459978,DH10B:1546116..1546883 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1546116&end=1546883&gene=paaF&aa=mselivsrqqrvllltlnrpaarnalnnallmqlvneleaaatdtsisvcvitgnarffaagadlnemaekdlaatlndtrpqlwarlqafnkpliaavngyalgagcelallcdvvvagenarfglpeitlgimpgaggtqrlirsvgkslaskmvlsgesitaqqaqqaglvsdvfpsdltleyalqlaskmarhsplalqaakqalrqsqevalqaglaqerqlftllaatedrhegisaflqkrtpdfkgr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=paaF+AND+escherichia+coli Pubmed(paaF)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=paaF Textpresso(paaF)] | |||
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Revision as of 23:37, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
paaF |
|---|---|
| Gene Synonym(s) |
ECK1390, b1393, JW1388, ydbS, ydbR[1] |
| Product Desc. |
putative enoyl-CoA hydratase/isomerase of phenylacetate degradation[2][3] Phenylacetic acid degradation; mutants are unable to use phenylacetate as a carbon source[4] |
| Product Synonyms(s) |
enoyl-CoA hydratase-isomerase[1], B1393[2][1], YdbR[2][1], YdbS[2][1], PaaF[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): paaABCDEFGHIJK[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
paaF mutants accumulate delta3-dehydroadipate.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.