pepD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''pepD'' | ''pepD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0238, b0237, JW0227, pepH''<ref name='LIB:Riley_2006'/> | ''ECK0238, b0237, JW0227, pepH''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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PepD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | PepD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Peptidase D, Xaa-His dipeptidase<ref name='LIB:EcoGene'/> | Peptidase D, Xaa-His dipeptidase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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aminoacyl-histidine dipeptidase (peptidase D)<ref name='LIB:Riley_2006'/>, B0237<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PepH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | aminoacyl-histidine dipeptidase (peptidase D)<ref name='LIB:Riley_2006'/>, B0237<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PepH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Cellular Component''' | |||
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:pepD|pepD]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:pepD|pepD]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=pepD&loc=MG1655:255716..254259,W3110:255716..254259,DH10B:229820..228363,REL606:260207..258750 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=260207&end=258750&gene=pepD&aa=mselsqlspqplwdifakicsiphpsyheeqlaeyivgwakekgfhverdqvgnilirkpatagmenrkpvvlqahldmvpqknndtvhdftkdpiqpyidgewvkargttlgadngigmasalavladenvvhgplevlltmteeagmdgafglqgnwlqadilintdseeegeiymgcaggidftsnlhldreavpagfetfkltlkglkgghsggeihvglgnankllvrflaghaeeldlrlidfnggtlrnaipreafatiavaadkvdvlkslvntyqeilknelaekeknlallldsvandkaaliaksrdtfirllnatpngvirnsdvakgvvetslnvgvvtmtdnnveihclirslidsgkdyvvsmldslgklagakteakgaypgwqpdanspvmhlvretyqrlfnktpniqiihaglecglfkkpypemdmvsigptitgphspdeqvhiesvghywtlltellkeipak Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pepD+AND+escherichia+coli Pubmed(pepD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=pepD Textpresso(pepD)] | |||
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Revision as of 23:36, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
pepD |
|---|---|
| Gene Synonym(s) |
ECK0238, b0237, JW0227, pepH[1] |
| Product Desc. |
Component of peptidase D[3] Peptidase D, Xaa-His dipeptidase[4] |
| Product Synonyms(s) |
aminoacyl-histidine dipeptidase (peptidase D)[1], B0237[2][1], PepH[2][1] |
| Function from GO |
Molecular Function
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
CsgD regulon, repressed. HT_Cmplx19_Cyt: PepD+Pgm+Zwf. HT_Cmplx41_Mem: Gnd+PepD.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.