rsmB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rsmB'' | ''rsmB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3275, b3289, JW3250, fmu, fsv, rrmB, fmv, sun, yhdB''<ref name='LIB:Riley_2006'/> | ''ECK3275, b3289, JW3250, fmu, fsv, rrmB, fmv, sun, yhdB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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16S rRNA m5C967 methyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | 16S rRNA m5C967 methyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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16S rRNA m(5)C967 methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | 16S rRNA m(5)C967 methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent<ref name='LIB:Riley_2006'/>, B3289<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhdB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fmv<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fmu<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RrmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sun<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent<ref name='LIB:Riley_2006'/>, B3289<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhdB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fmv<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fmu<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RrmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sun<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0031167 rRNA methylation ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): | transcription unit(s): | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rsmB&loc=MG1655:3433229..3434518,W3110:4205209..4203920,DH10B:3530974..3532263 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3530974&end=3532263&gene=rsmB&aa=mkkqrnlrsmaaqaveqvveqgqslsnilpplqqkvsdkdkallqelcfgvlrtlsqldwlinklmarpmtgkqrtvhylimvglyqllytripphaalaetvegaiaikrpqlkglingvlrqfqrqqeellaefnasdarylhpswllkrlqkaypeqwqsiveannqrppmwlrinrthhsrdswlalldeagmkgfphadypdavrletpapvhalpgfedgwvtvqdasaqgcmtwlapqngehildlcaapggktthilevapeaqvvavdideqrlsrvydnlkrlgmkatvkqgdgrypsqwcgeqqfdrilldapcsatgvirrhpdikwlrrdrdipelaqlqseildaiwphlktggtlvyatcsvlpeenslqikaflqrtadaelcetgtpeqpgkqnlpgaeegdgffyaklikk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsmB+AND+escherichia+coli Pubmed(rsmB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rsmB Textpresso(rsmB)] | |||
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Revision as of 23:34, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rsmB |
|---|---|
| Gene Synonym(s) |
ECK3275, b3289, JW3250, fmu, fsv, rrmB, fmv, sun, yhdB[1] |
| Product Desc. |
16S rRNA m5C967 methyltransferase[2][3] 16S rRNA m(5)C967 methyltransferase, SAM-dependent[4] |
| Product Synonyms(s) |
16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent[1], B3289[2][1], YhdB[2][1], RsmB[2][1], Fmv[2][1], Fmu[2][1], RrmB[2][1], Sun[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.