rutF:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rutF'' | ''rutF'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ycdH, ECK0998, b1007, JW5138''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ycdH, ECK0998, b1007, JW5138''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted flavin reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | predicted flavin reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Gene in rut operon for pyrimidine nitrogen catabolism; putative flavin:NADH reductase<ref name='LIB:EcoGene'/> | Gene in rut operon for pyrimidine nitrogen catabolism; putative flavin:NADH reductase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted oxidoreductase, flavin:NADH component<ref name='LIB:Riley_2006'/>, YcdH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1007<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RutF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted oxidoreductase, flavin:NADH component<ref name='LIB:Riley_2006'/>, YcdH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1007<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RutF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rutABCDEFG|rutABCDEFG]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rutABCDEFG|rutABCDEFG]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rutF&loc=MG1655:1069577..1069083,W3110:1070776..1070282,DH10B:1123505..1123011,REL606:1086144..1086638 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1086144&end=1086638&gene=rutF&aa=mscmgaavniittdgpagragftasavcsvtdtpptllvclnrgasvwpafnenrtlcvntlsagqeplsnlfggktpmehrfaaarwqtgvtgcpqleealvsfdcrisqvvsvgthdilfcaieaihrhttpyglvwfdrsyhalmrpac Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rutF+AND+escherichia+coli Pubmed(rutF)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rutF Textpresso(rutF)] | |||
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Revision as of 23:33, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rutF |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
predicted flavin reductase[2][3] Gene in rut operon for pyrimidine nitrogen catabolism; putative flavin:NADH reductase[4] |
| Product Synonyms(s) |
predicted oxidoreductase, flavin:NADH component[1], YcdH[2][1], B1007[2][1], RutF[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): rutABCDEFG[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
NtrC regulon. The rut operon is required for the utilization of thymidine, uridine and cytidine as nitrogen sources at 37C, but not at room temperature.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.