setA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''setA''  
''setA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0072, b0070, JW0069, yabM''<ref name='LIB:Riley_2006'/>
''ECK0072, b0070, JW0069, yabM''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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YabM MFS transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
YabM MFS transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Broad specificity sugar efflux transporter<ref name='LIB:EcoGene'/>
Broad specificity sugar efflux transporter<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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broad specificity sugar efflux system<ref name='LIB:Riley_2006'/>, B0070<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SetA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
broad specificity sugar efflux system<ref name='LIB:Riley_2006'/>, B0070<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SetA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0015767 lactose transport ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0015758 glucose transport ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0015542 sugar efflux transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0016020 membrane ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sgrS|sgrS]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sgrS|sgrS]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=setA&loc=MG1655:77621..78799,W3110:77621..78799,REL606:80425..81603 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=80425&end=81603&gene=setA&aa=miwimtmarrmngvyaafmlvafmmgvagalqaptlslflsrevgaqpfwiglfytvnaiagigvslwlakrsdsqgdrrkliifcclmaignallfafnrhyltlitcgvllaslantampqlfalareyadnsarevvmfssvmraqlslawvigpplafmlalnygftvmfsiaagiftlslvliafmlpsvarvelpsenalsmqggwqdsnvrmlfvastlmwtcntmyiidmplwisselglpdklagflmgtaagleipamilagyyvkrygkrrmmviavaagvlfytgliffnsrmalmtlqlfnavfigivagigmlwfqdlmpgragaattlftnsistgvilagviqgaiaqswghfavywviavisvvalfltakvkdv Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=setA+AND+escherichia+coli Pubmed(setA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=setA Textpresso(setA)]


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Revision as of 23:32, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

setA

Gene Synonym(s)

ECK0072, b0070, JW0069, yabM[1]

Product Desc.

YabM MFS transporter[2][3]

Broad specificity sugar efflux transporter[4]

Product Synonyms(s)

broad specificity sugar efflux system[1], B0070[2][1], SetA[2][1], YabM[2][1]

Function from GO

Biological Process

Molecular Function

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sgrS[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(setA)    Textpresso(setA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Major Facilitator Superfamily (MFS).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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