sgcQ:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''sgcQ''  
''sgcQ''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4292, b4303, JW4265, yjhM''<ref name='LIB:Riley_2006'/>
''ECK4292, b4303, JW4265, yjhM''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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putative nucleoside triphosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
putative nucleoside triphosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Putative gene in sgc gene cluster, function unknown<ref name='LIB:EcoGene'/>
Putative gene in sgc gene cluster, function unknown<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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KpLE2 phage-like element; predicted nucleoside triphosphatase product<ref name='LIB:Riley_2006'/>, B4303 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjhM product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SgcQ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
KpLE2 phage-like element; predicted nucleoside triphosphatase product<ref name='LIB:Riley_2006'/>, B4303 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjhM product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SgcQ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sgcR|sgcR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sgcR|sgcR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=sgcQ&loc=MG1655:4526940..4526134,W3110:4533597..4532791,DH10B:4628748..4627942,REL606:4509055..4508249 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4509055&end=4508249&gene=sgcQ&aa=mswlkevigtekaviamchlralpgdpsfdaqlgmnwvidkawddlmalqnggvdavmfsnefslpyltkvrpettaamariigqlmsdiripfgvnvlwdpvasfdlamatgakfireiftgayasdfgvwdtnvgetirhqhrigagevktlfnivpeaavylgnrdicsiakstvfnnhpdalcvsgltagtrtdsallkrvketvpdtvvlantgvclenveeqlsiadgcvtattfkkdgvfanfvdqarvsqfmekvhhirr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sgcQ+AND+escherichia+coli Pubmed(sgcQ)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sgcQ Textpresso(sgcQ)]


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Revision as of 23:31, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

sgcQ

Gene Synonym(s)

ECK4292, b4303, JW4265, yjhM[1]

Product Desc.

putative nucleoside triphosphatase[2][3]

Putative gene in sgc gene cluster, function unknown[4]

Product Synonyms(s)

KpLE2 phage-like element; predicted nucleoside triphosphatase product[1], B4303 product[2][1], YjhM product[2][1], SgcQ product[2][1]

Function from GO

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sgcR[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(sgcQ)    Textpresso(sgcQ)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.