speD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''speD'' | ''speD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0119, b0120, JW0116''<ref name='LIB:Riley_2006'/> | ''ECK0119, b0120, JW0116''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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adenosylmethionine decarboxylase, proenzyme<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | adenosylmethionine decarboxylase, proenzyme<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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S-adenosylmethionine decarboxylase, spermidine biosynthesis; two subunits by cleavage: residues 1-111 are the beta chain and 112-264 are the alpha chain (153 aa)<ref name='LIB:EcoGene'/> | S-adenosylmethionine decarboxylase, spermidine biosynthesis; two subunits by cleavage: residues 1-111 are the beta chain and 112-264 are the alpha chain (153 aa)<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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S-adenosylmethionine decarboxylase<ref name='LIB:Riley_2006'/>, B0120<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | S-adenosylmethionine decarboxylase<ref name='LIB:Riley_2006'/>, B0120<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yacC-speED|yacC-speED]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yacC-speED|yacC-speED]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=speD&loc=MG1655:135582..134788,W3110:135582..134788,DH10B:109686..108892,REL606:138385..137591 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=138385&end=137591&gene=speD&aa=mkklklhgfnnltkslsfciydicyaktaeerdgyiayidelynanrlteilsetcsiiganilniarqdyepqgasvtilvseepvdpklidktehpgplpetvvahldkshicvhtypeshpegglctfradievstcgvisplkalnylihqlesdivtidyrvrgftrdingmkhfidheinsiqnfmsddmkalydmvdvnvyqenifhtkmllkefdlkhymfhtkpedltdserqeitaalwkemreiyygrnmpav Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=speD+AND+escherichia+coli Pubmed(speD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=speD Textpresso(speD)] | |||
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Revision as of 23:30, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
speD |
|---|---|
| Gene Synonym(s) |
ECK0119, b0120, JW0116[1] |
| Product Desc. |
adenosylmethionine decarboxylase, proenzyme[2][3] S-adenosylmethionine decarboxylase, spermidine biosynthesis; two subunits by cleavage: residues 1-111 are the beta chain and 112-264 are the alpha chain (153 aa)[4] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): yacC-speED[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Paraquat toxicity observed in cells deficient in spermidine. The N-terminus of alpha chain, Ser112 is modified to pyrivic acid.[4]
References
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.