xylF:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''xylF''  
''xylF''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3555, b3566, JW3538, xylT''<ref name='LIB:Riley_2006'/>
''ECK3555, b3566, JW3538, xylT''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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XylF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
XylF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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D-xylose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B3566<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XylT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XylF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
D-xylose transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B3566<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XylT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XylF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0015752 D-ribose transport ([http://www.geneontology.org/GO.evidence.shtml IGI])
* GO:0015753 D-xylose transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0048029 monosaccharide binding ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:xylFGHR|xylFGHR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:xylFGHR|xylFGHR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=xylF&loc=MG1655:3729154..3730146,W3110:3909284..3908292,REL606:3661589..3662581,DH10B:3826731..3827723 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3826731&end=3827723&gene=xylF&aa=mkiknilltlctsllltnvaahakevkigmaiddlrlerwqkdrdifvkkaeslgakvfvqsangneetqmsqienminrgvdvlviipyngqvlsnvvkeakqegikvlaydrmindadidfyisfdnekvgelqakalvdivpqgnyflmggspvdnnaklfragqmkvlkpyvdsgkikvvgdqwvdgwlpenalkimenaltannnkidavvasndataggaiqalsaqglsgkvaisgqdadlagikriaagtqtmtvykpitllantaaeiavelgngqepkadttlnnglkdvpsrlltpidvnknnikdtvikdgfhkesel Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xylF+AND+escherichia+coli Pubmed(xylF)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=xylF Textpresso(xylF)]


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Revision as of 23:23, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

xylF

Gene Synonym(s)

ECK3555, b3566, JW3538, xylT[1]

Product Desc.

XylF[2][3];

Component of xylose ABC transporter[2][3]

Product Synonyms(s)

D-xylose transporter subunit[1], periplasmic-binding component of ABC superfamily[1], B3566[2][1], XylT[2][1], XylF[2][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): xylFGHR[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(xylF)    Textpresso(xylF)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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