ydeA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ydeA''  
''ydeA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1521, b1528, JW1521, sotB''<ref name='LIB:Riley_2006'/>
''ECK1521, b1528, JW1521, sotB''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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YdeA MFS transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
YdeA MFS transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Arabinose exporter, mutation reduces arabinose efflux; overexpression interferes with arabinose accumulation<ref name='LIB:EcoGene'/>
Arabinose exporter, mutation reduces arabinose efflux; overexpression interferes with arabinose accumulation<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted arabinose transporter<ref name='LIB:Riley_2006'/>, B1528<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted arabinose transporter<ref name='LIB:Riley_2006'/>, B1528<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0015292 uniporter activity ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ydeA|ydeA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ydeA|ydeA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ydeA&loc=MG1655:1615052..1616242,W3110:1618742..1619932,DH10B:1704677..1705867 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1704677&end=1705867&gene=ydeA&aa=mttntvsrkvawlrvvtlavaafifnttefvpvgllsdiaqsfhmqtaqvgimltiyawvvalmslpfmlmtsqverrklliclfvvfiashvlsflswsftvlvisrigvafahaifwsitaslairmapagkraqalsliatgtalamvlglplgrivgqyfgwrmtffaigigalitllclikllpllpsehsgslkslpllfrrpalmsiylltvvvvtahytaysyiepfvqniagfsanfatalllllggagiigsvifgklgnqyasalvstaialllvclalllpaanseihlgvlsifwgiammiiglgmqvkvlalapdatdvamalfsgifnigigagalvgnqvslhwsmsmigyvgavpafaaliwsiiifrrwpvtleeqtq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydeA+AND+escherichia+coli Pubmed(ydeA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ydeA Textpresso(ydeA)]


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Revision as of 23:14, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ydeA

Gene Synonym(s)

ECK1521, b1528, JW1521, sotB[1]

Product Desc.

YdeA MFS transporter[2][3]

Arabinose exporter, mutation reduces arabinose efflux; overexpression interferes with arabinose accumulation[4]

Product Synonyms(s)

predicted arabinose transporter[1], B1528[2][1], YdeA[2][1]

Function from GO

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydeA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ydeA)    Textpresso(ydeA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Major Facilitator Superfamily (MFS).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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