stfQ:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ydfN''  
''ydfN''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''stfQ, ECK1540, b1547, JW1540''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
''stfQ, ECK1540, b1547, JW1540''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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Qin prophage; predicted side tail fibre assembly protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Qin prophage; predicted side tail fibre assembly protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Function unknown, Qin prophage<ref name='LIB:EcoGene'/>
Function unknown, Qin prophage<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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Qin prophage; predicted side tail fibre assembly protein<ref name='LIB:Riley_2006'/>, B1547<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdfN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, StfQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
Qin prophage; predicted side tail fibre assembly protein<ref name='LIB:Riley_2006'/>, B1547<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdfN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, StfQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:tfaQ|tfaQ]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nohA|nohA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:tfaQ|tfaQ]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nohA|nohA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ydfN&loc=MG1655:1633871..1632909,W3110:1637561..1636599 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1637561&end=1636599&gene=ydfN&aa=mnitaltdntqgaaglelyevynngyptaygniihlkgmtavgegelligwsgtsgahapafirsrrdttdanwspwaqlytsahppaefypvgapipwpsdtvpsgyalmqgqtfdksaypklavaypsgvipdmrgwtikgkpasgravlsqeqdgikshthsasasstdlgtettssfdygtkstnntgahthsisgtansagahqhkssgafggtntsifpngytaisnlsagimsttsgsgqtrnagktssdgahthslsgtaasagahahtvgigahthsvaigshghtitvnaagnaentvkniafnyivrla Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydfN+AND+escherichia+coli Pubmed(ydfN)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ydfN Textpresso(ydfN)]


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Revision as of 23:14, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ydfN

Gene Synonym(s)

stfQ, ECK1540, b1547, JW1540[1][2][3]

Product Desc.

Qin prophage; predicted side tail fibre assembly protein[3][2]

Function unknown, Qin prophage[4]

Product Synonyms(s)

Qin prophage; predicted side tail fibre assembly protein[1], B1547[3][1], YdfN[3][1], StfQ[3][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tfaQ[3], nohA[3]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ydfN)    Textpresso(ydfN)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.