rlmG:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rlmG'' | ''rlmG'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ygjO, ECK3074, b3084, JW5513''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ygjO, ECK3074, b3084, JW5513''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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23S rRNA m<sup>2</sup>G1835 methyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | 23S rRNA m<sup>2</sup>G1835 methyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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23S rRNA mG1835 methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | 23S rRNA mG1835 methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted methyltransferase small domain<ref name='LIB:Riley_2006'/>, B3084<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RlmG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted methyltransferase small domain<ref name='LIB:Riley_2006'/>, B3084<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RlmG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ygjO|ygjO]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ygjO|ygjO]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rlmG&loc=MG1655:3233897..3232761,W3110:3234531..3233395,REL606:3167556..3168692 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3167556&end=3168692&gene=rlmG&aa=mskfyhsggpmshldngfrsltlqrfpatddvnplqaweaadeyllqqlddteirgpvlilndafgalscalaehkpysigdsyiselatrenlrlngidessvkfldstadypqqpgvvlikvpktlalleqqlralrkvvtsdtriiagakardihtstlelfekvlgpttttlawkkarlinctfnepqladapqtvswklegtdwtihnhanvfsrtgldigarffmqhlpenlegeivdlgcgngvigltlldknpqakvvfvdespmavassrlnvetnmpealdrcefminnalsgvepfrfnavlcnppfhqqhaltdnvawemfhharrclkingelyivanrhldyfhklkkifgncttiatnnkfvvlkavklgrrr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rlmG+AND+escherichia+coli Pubmed(rlmG)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rlmG Textpresso(rlmG)] | |||
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Revision as of 23:11, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rlmG |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
23S rRNA m2G1835 methyltransferase[2][3] 23S rRNA mG1835 methyltransferase, SAM-dependent[4] |
| Product Synonyms(s) |
predicted methyltransferase small domain[1], B3084[2][1], YgjO[2][1], RlmG[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
RlmG methyltransferase mutants have a disadvantage in competitve growth cultures with wild type (Sergiev, 2006). The rsmD gene name usage was based on an erroneous prediction that RlmG was a small subunit modification enzyme (Bujnicki, 2002).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.