rof:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rof'' | ''rof'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0188, b0189, JW0184, yaeO, mesJ''<ref name='LIB:Riley_2006'/> | ''ECK0188, b0189, JW0184, yaeO, mesJ''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Rho-binding antiterminator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | Rho-binding antiterminator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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anti-Rho (termination factor); pleiotropic multicopy suppressor of Ts mutations; ribosome-associated; growth-rate regulated<ref name='LIB:EcoGene'/> | anti-Rho (termination factor); pleiotropic multicopy suppressor of Ts mutations; ribosome-associated; growth-rate regulated<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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modulator of Rho-dependent transcription termination<ref name='LIB:Riley_2006'/>, B0189<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rof<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | modulator of Rho-dependent transcription termination<ref name='LIB:Riley_2006'/>, B0189<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rof<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0030401 transcription antiterminator activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0031554 regulation of transcription termination ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rof|rof]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rof|rof]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rof&loc=MG1655:213932..213678,W3110:213932..213678,DH10B:188036..187782,REL606:216774..216520 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=216774&end=216520&gene=rof&aa=msmndtyqpincddydnlelacqhhlmltlelkdgeklqakasdlvsrknveylvveaagetrelrldkitsfshpeigtvvvses Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rof+AND+escherichia+coli Pubmed(rof)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rof Textpresso(rof)] | |||
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Revision as of 23:10, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rof |
|---|---|
| Gene Synonym(s) |
ECK0188, b0189, JW0184, yaeO, mesJ[1] |
| Product Desc. |
Rho-binding antiterminator[2][3] anti-Rho (termination factor); pleiotropic multicopy suppressor of Ts mutations; ribosome-associated; growth-rate regulated[4] |
| Product Synonyms(s) |
modulator of Rho-dependent transcription termination[1], B0189[2][1], YaeO[2][1], Rof[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
This is the real "mesJ" minE suppressor, not yaeN.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.