rpiB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rpiB''
''rpiB''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''alsI, ECK4083, b4090, JW4051, ycjA, yjcA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''alsI, ECK4083, b4090, JW4051, ycjA, yjcA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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allose 6-phosphate isomerase product, ribose 5-phosphate isomerase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
allose 6-phosphate isomerase product, ribose 5-phosphate isomerase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Ribose-5-phosphate isomerase B; allose-6-phosphate isomerase<ref name='LIB:EcoGene'/>
Ribose-5-phosphate isomerase B; allose-6-phosphate isomerase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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allose 6-phosphate isomerase, ribose 5-phosphate isomerase B<ref name='LIB:Riley_2006'/>, B4090<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlsI product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpiB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
allose 6-phosphate isomerase, ribose 5-phosphate isomerase B<ref name='LIB:Riley_2006'/>, B4090<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlsI product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpiB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0008786 allose_6-phosphate_isomerase_activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP])
* GO:0004751 ribose-5-phosphate_isomerase_activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP])
* GO:0005515 protein_binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0004751 ribose-5-phosphate isomerase activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
'''Biological Process'''
* GO:0019316 D-allose catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0019316 D-allose_catabolism ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:alsI|alsI]]<ref name='LIB:EcoCyc10.6'/>
transcription unit(s): [[:Category:Txn_unit:alsI|alsI]]<ref name='LIB:EcoCyc10.6'/>
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rpiB&loc=MG1655:4311373..4311822,W3110:4318028..4318477,DH10B:4411735..4412184,REL606:4292172..4292621 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4292172&end=4292621&gene=rpiB&aa=mkkiafgcdhvgfilkheivahlvergvevidkgtwssertdyphyasqvalavaggevdggilicgtgvgisiaankfagiravvcsepysaqlsrqhndtnvlafgsrvvglelakmivdawlgaqyeggrhqqrveaitaieqrrn Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpiB+AND+escherichia+coli Pubmed(rpiB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rpiB Textpresso(rpiB)]


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Revision as of 23:10, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rpiB

Gene Synonym(s)

alsI, ECK4083, b4090, JW4051, ycjA, yjcA[1][2]

Product Desc.

allose 6-phosphate isomerase product, ribose 5-phosphate isomerase B[2][3];

Component of RIB5PISOMB-CPLX[2]

Ribose-5-phosphate isomerase B; allose-6-phosphate isomerase[4]

Product Synonyms(s)

allose 6-phosphate isomerase, ribose 5-phosphate isomerase B[1], B4090[2][1], YjcA[2][1], AlsI product[2][1], RpiB product[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): alsI[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rpiB)    Textpresso(rpiB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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