yffL:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yffL'' | ''yffL'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2438, b2443, unique to MG1655''<ref name='LIB:Riley_2006'/> | ''ECK2438, b2443, unique to MG1655''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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CPZ-55 prophage; predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | CPZ-55 prophage; predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Function unknown, Eut/CPZ-55 prophage<ref name='LIB:EcoGene'/> | Function unknown, Eut/CPZ-55 prophage<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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CPZ-55 prophage; predicted protein<ref name='LIB:Riley_2006'/>, B2443<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YffL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | CPZ-55 prophage; predicted protein<ref name='LIB:Riley_2006'/>, B2443<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YffL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yffL|yffL]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yffL|yffL]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yffL&loc=MG1655:2558279..2558920,DH10B:2650044..2650685 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2650044&end=2650685&gene=yffL&aa=mfatkdpefenrintnksprnaatcrgryekqakgeflmsdmlaveqetnndvrqflnkinelrnkapkneetkheehtpdnheetdhheakqqeqawrgnlryldtlnrldevlprklyerwekehtvndeavlralcyfagtgknsqlgwcrvgrgtidkrarlskntvkkcldrlvnhfklvertegyipgsaerecneyqllfkpynmk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yffL+AND+escherichia+coli Pubmed(yffL)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yffL Textpresso(yffL)] | |||
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Revision as of 23:05, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yffL |
|---|---|
| Gene Synonym(s) |
ECK2438, b2443, unique to MG1655[1] |
| Product Desc. |
CPZ-55 prophage; predicted protein[2][3] Function unknown, Eut/CPZ-55 prophage[4] |
| Product Synonyms(s) |
CPZ-55 prophage; predicted protein[1], B2443[2][1], YffL[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
56 bp downstream of the yffL stop codon is the first of four tandem intergenic repeats CPX-R(1-4) of unknown function. CPX-R(1-3) are direct 22 bp repeats and CPX-R4 is a 19 bp version.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.