ygeX:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ygeX'' | ''ygeX'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2867, b2871, JW2839''<ref name='LIB:Riley_2006'/> | ''ECK2867, b2871, JW2839''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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2,3-diaminopropionate ammonia-lyase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | 2,3-diaminopropionate ammonia-lyase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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2,3-diaminopropionate ammonia lyase<ref name='LIB:EcoGene'/> | 2,3-diaminopropionate ammonia lyase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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2,3-diaminopropionate ammonia-lyase<ref name='LIB:Riley_2006'/>, B2871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 2,3-diaminopropionate ammonia-lyase<ref name='LIB:Riley_2006'/>, B2871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0008838 diaminopropionate ammonia-lyase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0019796 nonprotein amino acid catabolic process ([http://www.geneontology.org/GO.evidence.shtml ISA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ygeX|ygeX]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ygeX|ygeX]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ygeX&loc=MG1655:3005532..3006728,W3110:3006166..3007362,REL606:2893265..2894461,DH10B:3099402..3100598 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3099402&end=3100598&gene=ygeX&aa=msvfslkidiadnkffngetsplfsqsqaklarqfhqkiagyrptplcalddlanlfgvkkilvkdeskrfglnafkmlggayaiaqllcekyhldietlsfehlknaigekmtfatttdgnhgrgvawaaqqlgqnaviympkgsaqervdailnlgaecivtdmnyddtvrltmqhaqqhgwevvqdtawegytkiptwimqgyatladeaveqmremgvtpthvllqagvgamaggvlgylvdvyspqnlhsiivepdkadciyrsgvkgdivnvggdmatimaglacgepnplgweilrncatqfiscqdsvaalgmrvlgnpygndpriisgesgavglgvlaavhyhpqrqslmeklalnkdavvlvistegdtdvkhyrevvwegkhavap Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygeX+AND+escherichia+coli Pubmed(ygeX)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ygeX Textpresso(ygeX)] | |||
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Revision as of 23:03, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ygeX |
|---|---|
| Gene Synonym(s) |
ECK2867, b2871, JW2839[1] |
| Product Desc. |
2,3-diaminopropionate ammonia-lyase[2][3]; Component of 2,3-diaminopropionate ammonia-lyase[3] 2,3-diaminopropionate ammonia lyase[4] |
| Product Synonyms(s) |
2,3-diaminopropionate ammonia-lyase[1], B2871[2][1], YgeX[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The N-terminus of the overexpressed protein has been sequenced, but the natural RBS was not used so it is not a Verified protein. the initial Met is cleaved. The N-terminus of the native S. typhimurium YgeX has been Verified (Nagasawa et al., 1988).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.