yjeF:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yjeF'' | ''yjeF'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4163, b4167, JW4125''<ref name='LIB:Riley_2006'/> | ''ECK4163, b4167, JW4125''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted carbohydrate kinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | predicted carbohydrate kinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Putative kinase, ribokinase-like superfamily<ref name='LIB:EcoGene'/> | Putative kinase, ribokinase-like superfamily<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted carbohydrate kinase product<ref name='LIB:Riley_2006'/>, B4167 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeF product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted carbohydrate kinase product<ref name='LIB:Riley_2006'/>, B4167 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeF product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yjeFE-amiB-mutL-miaA-hfq-hflXKC|yjeFE-amiB-mutL-miaA-hfq-hflXKC]]<ref name='LIB:EcoCyc10.6'/>, ORF55-ORF17-amiB-mutL-miaA-hfq-hflXKC | transcription unit(s): [[:Category:Txn_unit:yjeFE-amiB-mutL-miaA-hfq-hflXKC|yjeFE-amiB-mutL-miaA-hfq-hflXKC]]<ref name='LIB:EcoCyc10.6'/>, ORF55-ORF17-amiB-mutL-miaA-hfq-hflXKC | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yjeF&loc=MG1655:4392089..4393636,W3110:4398746..4400293,REL606:4372221..4373768,DH10B:4492451..4493998 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4492451&end=4493998&gene=yjeF&aa=mtdhtmkknpvsiphtvwyaddirrgereaadvlgltlyelmlrageaafqvcrsaypdarhwlvlcghgnnggdgyvvarlakavgievtllaqesdkplpeeaalareawlnaggeihasnivwpesvdlivdallgtglrqapresisqlidhanshpapivavdipsgllaetgatpgavinadhtitfialkpglltgkardvtgqlhfdslgldswlagqetkiqrfsaeqlshwlkprrptshkgdhgrlviiggdhgtagairmtgeaalragaglvrvltrseniaplltarpelmvheltmdslteslewadvvvigpglgqqewgkkalqkvenfrkpmlwdadalnllainpdkrhnrvitphpgeaarllgcsvaeiesdrlhcakrlvqryggvavlkgagtvvaahpdalgiidagnagmasggmgdvlsgiigallgqklspydaacagcvahgaaadvlaarfgtrgmlatdlfstlqrivnpevtdknhdessnsap Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjeF+AND+escherichia+coli Pubmed(yjeF)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yjeF Textpresso(yjeF)] | |||
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Revision as of 22:56, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yjeF |
|---|---|
| Gene Synonym(s) |
ECK4163, b4167, JW4125[1] |
| Product Desc. |
predicted carbohydrate kinase[2][3] Putative kinase, ribokinase-like superfamily[4] |
| Product Synonyms(s) |
predicted carbohydrate kinase product[1], B4167 product[2][1], YjeF product[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): yjeFE-amiB-mutL-miaA-hfq-hflXKC[2], ORF55-ORF17-amiB-mutL-miaA-hfq-hflXKC |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Insertions in yjeF indicate this gene is likely to be non-essential. YjeF is homologous to B. subtilis YxkO which belongs to the UPF0031 family. AFMB Structural Genomics target No. 61 (http://afmb.cnrs-mrs.fr/article171.html). otherPDB (B. subtilis): 1KYH.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.