yjjN:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yjjN'' | ''yjjN'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4348, b4358, JW5793''<ref name='LIB:Riley_2006'/> | ''ECK4348, b4358, JW5793''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted oxidoreductase, Zn-dependent and NAD(P)-binding<ref name='LIB:EcoCyc10.6'/>; predicted L-galactonate oxidoreductase<ref name='LIB:EcoCyc11.1'/> | predicted oxidoreductase, Zn-dependent and NAD(P)-binding<ref name='LIB:EcoCyc10.6'/>; predicted L-galactonate oxidoreductase<ref name='LIB:EcoCyc11.1'/> | ||
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L-galactonate oxidoreductase; L-galactonate catabolism; mutants grow very poorly on L-galactonate (Reed, 2006)<ref name='LIB:EcoGene'/> | L-galactonate oxidoreductase; L-galactonate catabolism; mutants grow very poorly on L-galactonate (Reed, 2006)<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted oxidoreductase, Zn-dependent and NAD(P)-binding product<ref name='LIB:Riley_2006'/>, B4358 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjjN product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted oxidoreductase, Zn-dependent and NAD(P)-binding product<ref name='LIB:Riley_2006'/>, B4358 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjjN product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0019584 galactonate catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0034195 L-galactonate catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yjjN|yjjN]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yjjN|yjjN]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yjjN&loc=MG1655:4594013..4595035,W3110:4600670..4601692,REL606:4585224..4586246 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4585224&end=4586246&gene=yjjN&aa=mesrimstmnvlicqqpkelvwkqreipipgdnealikiksvgicgtdihawggnqpffsyprvlgheicgeivglgkniadlkngqqvavipyvacqqcpacksgrtnccekisvigvhqdggfseylsvpvanilpadgidpqaaaliepfaisahavrraaiapgeqvlvvgagpiglgaaaiakadgaqvvvadtsparrehvatrlelplldpsaedfdaqlraqfggslaqkvidatgnqhamnntvnlirhggtvvfvglfkgelqfsdpefhkkettmmgsrnatpedfakvgrlmaegkitadmmlthrypfatlaetyerdvinnrelikgvitf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjjN+AND+escherichia+coli Pubmed(yjjN)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yjjN Textpresso(yjjN)] | |||
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Revision as of 22:54, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yjjN |
|---|---|
| Gene Synonym(s) |
ECK4348, b4358, JW5793[1] |
| Product Desc. |
predicted oxidoreductase, Zn-dependent and NAD(P)-binding[2]; predicted L-galactonate oxidoreductase[3] L-galactonate oxidoreductase; L-galactonate catabolism; mutants grow very poorly on L-galactonate (Reed, 2006)[4] |
| Product Synonyms(s) |
predicted oxidoreductase, Zn-dependent and NAD(P)-binding product[1], B4358 product[2][1], YjjN product[2][1] |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
AFMB Structural Genomics target No. 62 (http://afmb.cnrs-mrs.fr/article171.html). Upregulated during growth on D-galactonate (Reed, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.