yncD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yncD'' | ''yncD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1445, b1451, JW1446''<ref name='LIB:Riley_2006'/> | ''ECK1445, b1451, JW1446''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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probable TonB-dependent receptor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | probable TonB-dependent receptor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Putative TonB-dependent outer membrane receptor<ref name='LIB:EcoGene'/> | Putative TonB-dependent outer membrane receptor<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted iron outer membrane transporter<ref name='LIB:Riley_2006'/>, B1451<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YncD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted iron outer membrane transporter<ref name='LIB:Riley_2006'/>, B1451<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YncD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Cellular Component''' | |||
* GO:0009279 cell outer membrane ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yncD|yncD]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yncD|yncD]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yncD&loc=MG1655:1521089..1518987,W3110:1524779..1522677,DH10B:1611684..1609582,REL606:1493175..1491073 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1493175&end=1491073&gene=yncD&aa=mkifsvrqtvlpallvlspvvfaadeqtmivsaapqvvseldtpaavsvvdgeemrlatprinlsesltgvpglqvqnrqnyaqdlqlsirgfgsrstygirgirlyvdgipatmpdgqgqtsnidlssvqnvevlrgpfsalygnasggvmnvttqtgqqpptieassyygsfgswryglkatgatgdgtqpgdvdytvsttrftthgyrdhsgaqknlanaklgvrideasklslifnsvdikaddpggltkaewkanpqqapraeqydtrktikqtqaglryerslssrddmsvmmyagerettqyqsipmapqlnpshaggvitlqrhyqgidsrwthrgelgvpvtfttglnyenmsenrkgynnfrlnsgmpeygqkgelrrdernlmwnidpylqtqwqlseklsldagvryssvwfdsndhyvtpgngddsgdasyhkwlpagslkyamtdawniylaagrgfetptinelsyradgqsgmnlglkpstndtieigsktrigdgllslalfqtdtddeivvdsssggrttyknagktrrqgaelawdqrfagdfrvnaswtwldatyrsnvcneqdcngnrmpgiarnmgfasigyvpedgwyagtearymgdimaddentakapsytlvglftgykynyhnltvdlfgrvdnlfdkeyvgsvivnesngryyepspgrnygvgmniawrfe Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yncD+AND+escherichia+coli Pubmed(yncD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yncD Textpresso(yncD)] | |||
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Revision as of 22:52, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yncD |
|---|---|
| Gene Synonym(s) |
ECK1445, b1451, JW1446[1] |
| Product Desc. |
probable TonB-dependent receptor[2][3] Putative TonB-dependent outer membrane receptor[4] |
| Product Synonyms(s) |
predicted iron outer membrane transporter[1], B1451[2][1], YncD[2][1] |
| Function from GO |
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
yncD and fhuA are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.