rutF:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''rutF''  
''rutF''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ycdH, ECK0998, b1007, JW5138''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ycdH, ECK0998, b1007, JW5138''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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predicted flavin reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
predicted flavin reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Gene in rut operon for pyrimidine nitrogen catabolism; putative flavin:NADH reductase<ref name='LIB:EcoGene'/>
Gene in rut operon for pyrimidine nitrogen catabolism; putative flavin:NADH reductase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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predicted oxidoreductase, flavin:NADH component<ref name='LIB:Riley_2006'/>, YcdH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1007<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RutF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted oxidoreductase, flavin:NADH component<ref name='LIB:Riley_2006'/>, YcdH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1007<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RutF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rutABCDEFG|rutABCDEFG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rutABCDEFG|rutABCDEFG]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 05:52, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rutF

Gene Synonym(s)

ycdH, ECK0998, b1007, JW5138[1][2]

Product Desc.

predicted flavin reductase[2][3]

Gene in rut operon for pyrimidine nitrogen catabolism; putative flavin:NADH reductase[4]

Product Synonyms(s)

predicted oxidoreductase, flavin:NADH component[1], YcdH[2][1], B1007[2][1], RutF[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rutABCDEFG[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


NtrC regulon. The rut operon is required for the utilization of thymidine, uridine and cytidine as nitrogen sources at 37C, but not at room temperature.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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