ppdD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''ppdD''  
''ppdD''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK0107, b0108, JW0104''<ref name='LIB:Riley_2006'/>
''ECK0107, b0108, JW0104''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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prepilin peptidase dependent protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
prepilin peptidase dependent protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Type IV pilin; function unknown; first 6 residues may be cleaved by prepilin peptidase to leave an N-terminal methylphenylalanine<ref name='LIB:EcoGene'/>
Type IV pilin; function unknown; first 6 residues may be cleaved by prepilin peptidase to leave an N-terminal methylphenylalanine<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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predicted major pilin subunit<ref name='LIB:Riley_2006'/>, B0108<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpdD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted major pilin subunit<ref name='LIB:Riley_2006'/>, B0108<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpdD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hofC|hofC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hofC|hofC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 05:19, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ppdD

Gene Synonym(s)

ECK0107, b0108, JW0104[1]

Product Desc.

prepilin peptidase dependent protein[2][3]

Type IV pilin; function unknown; first 6 residues may be cleaved by prepilin peptidase to leave an N-terminal methylphenylalanine[4]

Product Synonyms(s)

predicted major pilin subunit[1], B0108[2][1], PpdD[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hofC[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


ppdD has been demonstrated to have a CRP-S promoter co-regulated by both Crp and Sxy (Cameron, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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