pbpG:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''pbpG'' | ''pbpG'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2127, b2134, JW5355, yohB''<ref name='LIB:Riley_2006'/> | ''ECK2127, b2134, JW5355, yohB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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penicillin-binding protein 7<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | penicillin-binding protein 7<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Penicillin-binding proteins PBP7 and PBP8; murein meso-DAP-alanine DD endopeptidase, periplasmic; uniquely binds beta-lactam penems, lysing non-growing cells; mutant has biofilm defect<ref name='LIB:EcoGene'/> | Penicillin-binding proteins PBP7 and PBP8; murein meso-DAP-alanine DD endopeptidase, periplasmic; uniquely binds beta-lactam penems, lysing non-growing cells; mutant has biofilm defect<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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D-alanyl-D-alanine endopeptidase<ref name='LIB:Riley_2006'/>, B2134<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YohB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | D-alanyl-D-alanine endopeptidase<ref name='LIB:Riley_2006'/>, B2134<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YohB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0000270 peptidoglycan metabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0007047 cell wall organization ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0043093 binary fission ([http://www.geneontology.org/GO.evidence.shtml IGI,IMP]) | |||
'''Molecular Function''' | |||
* GO:0004175 endopeptidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:pbpG|pbpG]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:pbpG|pbpG]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=pbpG&loc=MG1655:2222892..2221960,W3110:2228204..2227272,DH10B:2313900..2312968,REL606:2176108..2175176 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2176108&end=2175176&gene=pbpG&aa=mlimpkfrvslfslalmlavpfapqavaktaaattasqpeiasgsamivdlntnkviysnhpdlvrpiasisklmtamvvldarlpldeklkvdisqtpemkgvysrvrlnseisrkdmlllalmssenraaaslahhypggykafikamnakakslgmnntrfveptglsvhnvstardltklliaskqypligqlsttredmatfsnptytlpfrntnhlvyrdnwniqltktgftnaaghclvmrtvinnkpvalvvmdafgkythfadasrlrtwietgkvmpvpaaalsykkqkaaqmaaagqtaqnd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pbpG+AND+escherichia+coli Pubmed(pbpG)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=pbpG Textpresso(pbpG)] | |||
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Revision as of 23:37, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
pbpG |
|---|---|
| Gene Synonym(s) |
ECK2127, b2134, JW5355, yohB[1] |
| Product Desc. |
penicillin-binding protein 7[2][3] Penicillin-binding proteins PBP7 and PBP8; murein meso-DAP-alanine DD endopeptidase, periplasmic; uniquely binds beta-lactam penems, lysing non-growing cells; mutant has biofilm defect[4] |
| Product Synonyms(s) |
D-alanyl-D-alanine endopeptidase[1], B2134[2][1], YohB[2][1], PbpG[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
PBP8 is an artifactual OmpT-cleaved proteolytic degradation product of PBP7. PBP7 and PBP8 are also referred to as PBP8a and PBP8b. Earlier conventions had the PBP7 amd PBP8 names reversed.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.