panE:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''panE'' | ''panE'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0419, b0425, JW0415, apbA''<ref name='LIB:Riley_2006'/> | ''ECK0419, b0425, JW0415, apbA''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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2-DEHYDROPANTOATE- | 2-DEHYDROPANTOATE- | ||
Ketopantoate reductase, NADPH-dependent; also indirectly involved in the alternative pathway for pyrimidine biosynthesis<ref name='LIB:EcoGene'/> | Ketopantoate reductase, NADPH-dependent; also indirectly involved in the alternative pathway for pyrimidine biosynthesis<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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2-dehydropantoate reductase, NADPH-specific<ref name='LIB:Riley_2006'/>, B0425<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PanE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ketopantoate reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 2-dehydropantoate 2-reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, (R)-pantoate:NADP+ 2-oxidoreductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 2-dehydropantoate reductase, NADPH-specific<ref name='LIB:Riley_2006'/>, B0425<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PanE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ketopantoate reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 2-dehydropantoate 2-reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, (R)-pantoate:NADP+ 2-oxidoreductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0008677 2-dehydropantoate 2-reductase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0050661 NADP binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0033317 pantothenate biosynthetic process from valine ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yajL|yajL]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yajL|yajL]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=panE&loc=MG1655:443739..442828,W3110:443739..442828,DH10B:383070..382159,REL606:412026..412937 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=412026&end=412937&gene=panE&aa=mkitvlgcgalgqlwltalckqghevqgwlrvpqpycsvnlvetdgsifnesltandpdflatsdlllvtlkawqvsdavkslastlpvttpillihngmgtieelqniqqpllmgttthaarrdgnviihvangithigparqqdgdysyladilqtvlpdvawhnniraelwrklavncvinpltaiwncpngelrhhpqeimqiceevaaviereghhtsaedlrdyvmqvidataenissmlqdiralrhteidyingfllrrarahgiavpentrlfemvkrkeseyerigtglprpw Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=panE+AND+escherichia+coli Pubmed(panE)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=panE Textpresso(panE)] | |||
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Revision as of 23:37, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
panE |
|---|---|
| Gene Synonym(s) |
ECK0419, b0425, JW0415, apbA[1] |
| Product Desc. |
2-DEHYDROPANTOATE- Ketopantoate reductase, NADPH-dependent; also indirectly involved in the alternative pathway for pyrimidine biosynthesis[2] |
| Product Synonyms(s) |
2-dehydropantoate reductase, NADPH-specific[1], B0425[3][1], PanE[3][1], ketopantoate reductase[3][1], 2-dehydropantoate 2-reductase[3][1], (R)-pantoate:NADP+ 2-oxidoreductase[3][1], ApbA[3][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Sequence verified by mass spectrometry (obs=33870), Met is not clipped. False positive lipoprotein prediction, unprocessed, verified by mass spectrometry.[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7