ompX:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ompX'' | ''ompX'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0803, b0814, JW0799, ompP, ybiG, G8003''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0803, b0814, JW0799, ompP, ybiG, G8003''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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outer membrane protein X<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | outer membrane protein X<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Outer membrane protein X; role in inducing RNAP-sigma E production<ref name='LIB:EcoGene'/> | Outer membrane protein X; role in inducing RNAP-sigma E production<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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outer membrane protein<ref name='LIB:Riley_2006'/>, B0814<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbiG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | outer membrane protein<ref name='LIB:Riley_2006'/>, B0814<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbiG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ompX|ompX]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ompX|ompX]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ompX&loc=MG1655:849673..850188,W3110:850872..851387,DH10B:903601..904116,REL606:843075..843590 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=843075&end=843590&gene=ompX&aa=mkkiaclsalaavlaftagtsvaatstvtggyaqsdaqgqmnkmggfnlkyryeednsplgvigsftyteksrtassgdynknqyygitagpayrindwasiygvvgvgygkfqtteyptykhdtsdygfsygaglqfnpmenvaldfsyeqsrirsvdvgtwiagvgyrf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ompX+AND+escherichia+coli Pubmed(ompX)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ompX Textpresso(ompX)] | |||
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Revision as of 23:37, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ompX |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
outer membrane protein X[2][3] Outer membrane protein X; role in inducing RNAP-sigma E production[4] |
| Product Synonyms(s) |
outer membrane protein[1], B0814[2][1], YbiG[2][1], OmpP[2][1], OmpX[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ompX is nduced by acid or base. OmpX is regulated by cyaR sRNA (De Lay, 2009).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.