nagA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''nagA''  
''nagA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0665, b0677, JW0663''<ref name='LIB:Riley_2006'/>
''ECK0665, b0677, JW0663''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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NagA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
NagA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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N-acetylglucosamine-6-phosphate deacetylase<ref name='LIB:EcoGene'/>
N-acetylglucosamine-6-phosphate deacetylase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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N-acetylglucosamine-6-phosphate deacetylase<ref name='LIB:Riley_2006'/>, B0677<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NagA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
N-acetylglucosamine-6-phosphate deacetylase<ref name='LIB:Riley_2006'/>, B0677<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NagA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0006046 N-acetylglucosamine catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0008270 zinc ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008448 N-acetylglucosamine-6-phosphate deacetylase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:nagA|nagA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nagBACD|nagBACD]]<ref name='LIB:EcoCyc10.6'/>, OP00058, nagB  
transcription unit(s): [[:Category:Txn_unit:nagA|nagA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nagBACD|nagBACD]]<ref name='LIB:EcoCyc10.6'/>, OP00058, nagB  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=nagA&loc=MG1655:701974..700826,W3110:703173..702025,DH10B:754566..753418,REL606:684846..683698 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=684846&end=683698&gene=nagA&aa=myaltqgriftgheflddhavviadgliksvcpvaelppeieqrslngailspgfidvqlngcggvqfndtaeavsvetleimqkaneksgctnylptlittsdelmkqgvrvmreylakhpnqalglhlegpwlnlvkkgthnpnfvrkpdaalvdflcenadvitkvtlapemvpaevisklanagivvsaghsnatlkeakagfragitfathlynampyitgrepglagaildeadiycgiiadglhvdyanirnakrlkgdklclvtdatapaganieqfifagktiyyrnglcvdengtlsgssltmiegvrnlvehcgialdevlrmatlyparaigvekrlgtlaagkvanltaftpdfkitktivngnevvtq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nagA+AND+escherichia+coli Pubmed(nagA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nagA Textpresso(nagA)]


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Revision as of 23:41, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

nagA

Gene Synonym(s)

ECK0665, b0677, JW0663[1]

Product Desc.

NagA[2][3];

Component of N-acetylglucosamine-6-phosphate deacetylase[2][3]

N-acetylglucosamine-6-phosphate deacetylase[4]

Product Synonyms(s)

N-acetylglucosamine-6-phosphate deacetylase[1], B0677[2][1], NagA[2][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nagA[2], nagBACD[2], OP00058, nagB

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(nagA)    Textpresso(nagA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Mg(2+) stimulon-PhoPQ regulon.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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