nac:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''nac'' | ''nac'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1983, b1988, JW1967''<ref name='LIB:Riley_2006'/> | ''ECK1983, b1988, JW1967''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Nac transcriptional activator<ref name='LIB:EcoCyc10.6'/>; Nac transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/> | Nac transcriptional activator<ref name='LIB:EcoCyc10.6'/>; Nac transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/> | ||
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Repressor of gdhA transcription; RpoN, GlnG(NtrC) regulons; pleiotropic effects<ref name='LIB:EcoGene'/> | Repressor of gdhA transcription; RpoN, GlnG(NtrC) regulons; pleiotropic effects<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator of nitrogen assimilation<ref name='LIB:Riley_2006'/>, B1988<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Nac<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator of nitrogen assimilation<ref name='LIB:Riley_2006'/>, B1988<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Nac<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
'''Biological Process''' | |||
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:nac|nac]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:nac|nac]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=nac&loc=MG1655:2059957..2059040,W3110:2064070..2063153,DH10B:2150965..2150048,REL606:1999933..1999016 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1999933&end=1999016&gene=nac&aa=mnfrrlkyfvkivdigsltqaaevlhiaqpalsqqvatlegelnqqllirtkrgvtptdagkilytharailrqceqaqlavhnvgqalsgqvsigfapgtaassitmpllqavraefpeiviylhensgavlneklinhqldmaviyehspvagvssqallkedlflvgtqdcpgqsvdvnaiaqmnlflpsdysairlrvdeafslrrltakvigeiesiatltaaiasgmgvavlpesaarslcgavngwmsrittpsmslslslnlparanlspqaqavkellmsvisspvmekrqwqlvs Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nac+AND+escherichia+coli Pubmed(nac)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nac Textpresso(nac)] | |||
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Revision as of 23:41, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
nac |
|---|---|
| Gene Synonym(s) |
ECK1983, b1988, JW1967[1] |
| Product Desc. |
Nac transcriptional activator[2]; Nac transcriptional dual regulator[3] Repressor of gdhA transcription; RpoN, GlnG(NtrC) regulons; pleiotropic effects[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator of nitrogen assimilation[1], B1988[2][1], Nac[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
LysR family. Downregulated twofold by GSNO in defined medium (aerobic).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.