hypC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''hypC'' | ''hypC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2723, b2728, JW2698, hydB''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK2723, b2728, JW2698, hydB''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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protein involved in hydrogenase 3 maturation<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | protein involved in hydrogenase 3 maturation<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Hydrogenase 3 chaperone-type protein; required for Hyd-3 metallocenter assembly, binds HycE subunit<ref name='LIB:EcoGene'/> | Hydrogenase 3 chaperone-type protein; required for Hyd-3 metallocenter assembly, binds HycE subunit<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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protein required for maturation of hydrogenases 1 and 3<ref name='LIB:Riley_2006'/>, B2728<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HydB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HypC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | protein required for maturation of hydrogenases 1 and 3<ref name='LIB:Riley_2006'/>, B2728<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HydB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HypC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:hypBCDE-fhlA|hypBCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypABCDE-fhlA|hypABCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypBCDE|hypBCDE]]<ref name='LIB:EcoCyc10.6'/>, hydBEF, [[:Category:Txn_unit:hypABCDE|hypABCDE]]<ref name='LIB:EcoCyc10.6'/>, OP00209 | transcription unit(s): [[:Category:Txn_unit:hypBCDE-fhlA|hypBCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypABCDE-fhlA|hypABCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypBCDE|hypBCDE]]<ref name='LIB:EcoCyc10.6'/>, hydBEF, [[:Category:Txn_unit:hypABCDE|hypABCDE]]<ref name='LIB:EcoCyc10.6'/>, OP00209 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=hypC&loc=MG1655:2849886..2850158,W3110:2850520..2850792,REL606:2746724..2746996,DH10B:2942428..2942700 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2942428&end=2942700&gene=hypC&aa=mcigvpgqirtidgnqakvdvcgiqrdvdltlvgscdengqprvgqwvlvhvgfamsvineaeardtldalqnmfdvepdvgallygeek Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hypC+AND+escherichia+coli Pubmed(hypC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=hypC Textpresso(hypC)] | |||
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Revision as of 23:50, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
hypC |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
protein involved in hydrogenase 3 maturation[2][3] Hydrogenase 3 chaperone-type protein; required for Hyd-3 metallocenter assembly, binds HycE subunit[4] |
| Product Synonyms(s) |
protein required for maturation of hydrogenases 1 and 3[1], B2728[2][1], HydB[2][1], HypC[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): hypBCDE-fhlA[2], hypABCDE-fhlA[2], hypBCDE[2], hydBEF, hypABCDE[2], OP00209 |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
N-terminal Cys is required for function. hypC mutants have reduced Hyd-2 activity.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.