hspQ:Quickview: Difference between revisions
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''hspQ'' | ''hspQ'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''yccV, ECK0957, b0966, JW5970''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''yccV, ECK0957, b0966, JW5970''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
heat shock protein, hemimethylated DNA-binding protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | heat shock protein, hemimethylated DNA-binding protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
Heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein; mutation suppresses some dnaA(Ts)<ref name='LIB:EcoGene'/> | Heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein; mutation suppresses some dnaA(Ts)<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
DNA-binding protein, hemimethylated<ref name='LIB:Riley_2006'/>, B0966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YccV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HspQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding protein, hemimethylated<ref name='LIB:Riley_2006'/>, B0966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YccV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HspQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:yccV|yccV]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yccV|yccV]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=hspQ&loc=MG1655:1027944..1027627,W3110:1029143..1028826,DH10B:1081872..1081555 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1081872&end=1081555&gene=hspQ&aa=mwnftliskvkisrevtmiaskfgigqqvrhsllgylgvvvdidpvyslsepspdelavndelraapwyhvvmeddnglpvhtylaeaqlsselqdehpeqpsmdelaqtirkqlqaprlrn Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hspQ+AND+escherichia+coli Pubmed(hspQ)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=hspQ Textpresso(hspQ)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:51, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
hspQ |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
heat shock protein, hemimethylated DNA-binding protein[2][3]; Component of heat shock protein, hemimethylated DNA-binding protein[3] Heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein; mutation suppresses some dnaA(Ts)[4] |
| Product Synonyms(s) |
DNA-binding protein, hemimethylated[1], B0966[2][1], YccV[2][1], HspQ[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A mutation in hspQ allows some dnaA(Ts) strains to grow at 40C, and slows the degradation of DnaA508 at 40C. Despite forcing translation at the upstream start, some HspQ(YccV) protein likely initiating at this true start site was observed by d'Alencon et al. (2003). Binding to hemimethylated oriC is specific, but weak, possibly due to the extra 17 N-terminal residues on the purified HspQ(YccV). RpoH regulon.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.