hdeA:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''hdeA'' | ''hdeA'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK3494, b3510, JW3478, yhhC, yhiB''<ref name='LIB:Riley_2006'/> | ''ECK3494, b3510, JW3478, yhhC, yhiB''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
acid-resistance protein, possible chaperone<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | acid-resistance protein, possible chaperone<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
Periplasmic chaperone of acid-denatured proteins; H-NS repressed<ref name='LIB:EcoGene'/> | Periplasmic chaperone of acid-denatured proteins; H-NS repressed<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
stress response protein acid-resistance protein<ref name='LIB:Riley_2006'/>, B3510<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HdeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | stress response protein acid-resistance protein<ref name='LIB:Riley_2006'/>, B3510<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HdeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:hdeAB|hdeAB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:hdeAB|hdeAB]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=hdeA&loc=MG1655:3654763..3654431,W3110:3983675..3984007,DH10B:3752508..3752176,REL606:3586231..3585899 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3586231&end=3585899&gene=hdeA&aa=mkkvlgvilggllllpvvsnaadaqkaadnkkpvnswtcedflavdesfqptavgfaealnnkdkpedavldvqgiatvtpaivqactqdkqanfkdkvkgewdkikkdm Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hdeA+AND+escherichia+coli Pubmed(hdeA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=hdeA Textpresso(hdeA)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:53, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
hdeA |
|---|---|
| Gene Synonym(s) |
ECK3494, b3510, JW3478, yhhC, yhiB[1] |
| Product Desc. |
acid-resistance protein, possible chaperone[2][3]; Component of HdeA dimer, inactive form of acid-resistance protein[3] Periplasmic chaperone of acid-denatured proteins; H-NS repressed[4] |
| Product Synonyms(s) |
stress response protein acid-resistance protein[1], B3510[2][1], YhhC[2][1], YhiB[2][1], HdeA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Overexpression causes abnormal biofilm architecture. Acid-inducible and important for acid survival. HdeA and HdeB are both involved in periplasmic protein solubilization at pH 3; HdeA is involved in periplasmic protein solubilization at pH 2 (Kern, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.