gadX:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''gadX'' | ''gadX'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3501, b3516, JW3484, yhiX''<ref name='LIB:Riley_2006'/> | ''ECK3501, b3516, JW3484, yhiX''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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GadX transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | GadX transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Transcriptional activator for gadA and gadBC, AraC family; repressed by HNS and GadW; stimulated by RpoS<ref name='LIB:EcoGene'/> | Transcriptional activator for gadA and gadBC, AraC family; repressed by HNS and GadW; stimulated by RpoS<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, YhiX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B3516<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GadX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, YhiX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B3516<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GadX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP]) | |||
'''Molecular Function''' | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:gadAX|gadAX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:gadX|gadX]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:gadAX|gadAX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:gadX|gadX]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=gadX&loc=MG1655:3663833..3663009,W3110:3974605..3975429,DH10B:3761578..3760754,REL606:3595301..3594477 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3595301&end=3594477&gene=gadX&aa=mqslhgncliayarhkyiltmvngeyryfnggdlvfadasqirvdkcvenfvfvsrdtlslflpmlkeealnlhahkkvssllvhhcsrdipvfqevaqlsqnknlryaemlrkralifallsvfledehfiplllnvlqpnmrtrvctvinnniahewtlariasellmspsllkkklreeetsysqlltecrmqralqlivihgfsikrvavscgyhsvsyfiyvfrnyygmtpteyqersaqrlsnrdsaasivaqgnfygtdrsaegirl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gadX+AND+escherichia+coli Pubmed(gadX)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gadX Textpresso(gadX)] | |||
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Revision as of 23:57, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gadX |
|---|---|
| Gene Synonym(s) |
ECK3501, b3516, JW3484, yhiX[1] |
| Product Desc. |
GadX transcriptional activator[2][3] Transcriptional activator for gadA and gadBC, AraC family; repressed by HNS and GadW; stimulated by RpoS[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator[1], YhiX[2][1], B3516[2][1], GadX[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.