fur:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''fur'' | ''fur'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0671, b0683, JW0669''<ref name='LIB:Riley_2006'/> | ''ECK0671, b0683, JW0669''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Ferric iron uptake global transcriptional repressor; activated by Fe+2; zinc metalloprotein<ref name='LIB:EcoGene'/> | Ferric iron uptake global transcriptional repressor; activated by Fe+2; zinc metalloprotein<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport<ref name='LIB:Riley_2006'/>, B0683<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, negative regulator, regulates production of siderophores and transport systens for siderophores<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport<ref name='LIB:Riley_2006'/>, B0683<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, negative regulator, regulates production of siderophores and transport systens for siderophores<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0008270 zinc ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Cellular Component''' | |||
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:fur|fur]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fldA-fur|fldA-fur]]<ref name='LIB:EcoCyc10.6'/>, OP00163 | transcription unit(s): [[:Category:Txn_unit:fur|fur]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fldA-fur|fldA-fur]]<ref name='LIB:EcoCyc10.6'/>, OP00163 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=fur&loc=MG1655:709869..709423,W3110:711068..710622,DH10B:762461..762015,REL606:692741..692295 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=692741&end=692295&gene=fur&aa=mtdnntalkkaglkvtlprlkilevlqepdnhhvsaedlykrlidmgeeiglatvyrvlnqfddagivtrhnfeggksvfeltqqhhhdhlicldcgkviefsddsiearqreiaakhgirltnhslylyghcaegdcredehahegk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fur+AND+escherichia+coli Pubmed(fur)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fur Textpresso(fur)] | |||
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Revision as of 23:57, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
fur |
|---|---|
| Gene Synonym(s) |
ECK0671, b0683, JW0669[1] |
| Product Desc. |
Component of Fur transcriptional dual regulator[2][3] Ferric iron uptake global transcriptional repressor; activated by Fe+2; zinc metalloprotein[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport[1], B0683[2][1], Fur[2][1], negative regulator, regulates production of siderophores and transport systens for siderophores[2][1] |
| Function from GO |
Molecular Function
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Fur translation in coupled to the translation of the upstream leader pepidie Uof; Uof translation is inhibited by the antisense sRNA ryhB; Uof translation opens up a hairpin that blocks Fur translation (Vecerek, 2007). Amino acid composition analysis indicates that the first Met is mssing from the mature Fur protein (Wee, 1988). Binds TrxA (Kumar, 2004).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.