fimH:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''fimH'' | ''fimH'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4311, b4320, JW4283, pilE''<ref name='LIB:Riley_2006'/> | ''ECK4311, b4320, JW4283, pilE''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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minor fimbrial subunit, D-mannose specific adhesin<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | minor fimbrial subunit, D-mannose specific adhesin<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Minor type 1 fimbrial subunit; membrane-specific adhesin; mediates mannose-binding to host surfaces<ref name='LIB:EcoGene'/> | Minor type 1 fimbrial subunit; membrane-specific adhesin; mediates mannose-binding to host surfaces<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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minor component of type 1 fimbriae product<ref name='LIB:Riley_2006'/>, B4320 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilE product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FimH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | minor component of type 1 fimbriae product<ref name='LIB:Riley_2006'/>, B4320 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilE product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FimH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:fimAICDFGH|fimAICDFGH]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:fimAICDFGH|fimAICDFGH]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=fimH&loc=MG1655:4546831..4547733,W3110:4553488..4554390,REL606:4529722..4530624 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4529722&end=4530624&gene=fimH&aa=mkrvitlfavllmgwsvnawsfacktangtaipigggsanvyvnlapvvnvgqnlvvdlstqifchndypetitdyvtlqrgsayggvlsnfsgtvkysgssypfpttsetprvvynsrtdkpwpvalyltpvssaggvaikagsliavlilrqtnnynsddfqfvwniyanndvvvptggcdvsardvtvtlpdypgsvpipltvycaksqnlgyylsgttadagnsiftntasfspaqgvgvqltrngtiipanntvslgavgtsavslgltanyartggqvtagnvqsiigvtfvyq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fimH+AND+escherichia+coli Pubmed(fimH)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fimH Textpresso(fimH)] | |||
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Revision as of 00:00, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
fimH |
|---|---|
| Gene Synonym(s) |
ECK4311, b4320, JW4283, pilE[1] |
| Product Desc. |
minor fimbrial subunit, D-mannose specific adhesin[2][3]; Component of fimbrial complex[3] Minor type 1 fimbrial subunit; membrane-specific adhesin; mediates mannose-binding to host surfaces[4] |
| Product Synonyms(s) |
minor component of type 1 fimbriae product[1], B4320 product[2][1], PilE product[2][1], FimH product[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): fimAICDFGH[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Mutants of FimH have been isolated that auto-aggregate. False positive lipoprotein prediction, verified SPI substrate. FimH family.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.