fdnH:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''fdnH''  
''fdnH''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1469, b1475, JW1471''<ref name='LIB:Riley_2006'/>
''ECK1469, b1475, JW1471''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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formate dehydrogenase N, &beta; subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
formate dehydrogenase N, &beta; subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Formate dehydrogenase-N, Fe-S subunit, anaerobic; periplasmic<ref name='LIB:EcoGene'/>
Formate dehydrogenase-N, Fe-S subunit, anaerobic; periplasmic<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible<ref name='LIB:Riley_2006'/>, B1475<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FdnH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible<ref name='LIB:Riley_2006'/>, B1475<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FdnH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0008863 formate dehydrogenase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009061 anaerobic respiration ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0045333 cellular respiration ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0009326 formate dehydrogenase complex ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:fdnGHI|fdnGHI]]<ref name='LIB:EcoCyc10.6'/>, OP00216  
transcription unit(s): [[:Category:Txn_unit:fdnGHI|fdnGHI]]<ref name='LIB:EcoCyc10.6'/>, OP00216  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=fdnH&loc=MG1655:1548485..1549369,W3110:1552175..1553059,DH10B:1639080..1639964,REL606:1524611..1525495 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1524611&end=1525495&gene=fdnH&aa=mametqdiikrsatnsitppsqvrdykaevaklidvstcigckacqvacsewndirdevghcvgvydnpadlsakswtvmrfseteqngklewlirkdgcmhcedpgclkacpsagaiiqyangivdfqsencigcgyciagcpfniprlnkednrvykctlcvdrvsvgqepacvktcptgaihfgtkkemlelaeqrvaklkargyehagvynpegvggthvmyvlhhadqpelyhglpkdpkidtsvslwkgalkplaaagfiatfaglifhyigigpnkevdddeedhhe Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fdnH+AND+escherichia+coli Pubmed(fdnH)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fdnH Textpresso(fdnH)]


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Revision as of 00:00, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

fdnH

Gene Synonym(s)

ECK1469, b1475, JW1471[1]

Product Desc.

formate dehydrogenase N, β subunit[2][3];

Component of trimer complex of formate dehydrogenase-N α, β and γ subunits[2][3]; formate dehydrogenase-N[2][3]

Formate dehydrogenase-N, Fe-S subunit, anaerobic; periplasmic[4]

Product Synonyms(s)

formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible[1], B1475[2][1], FdnH[2][1]

Function from GO

Molecular Function

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fdnGHI[2], OP00216

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(fdnH)    Textpresso(fdnH)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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FdnH is co-exported bound to Tat substrate FdnG. HT_Cmplx12_Mem: FdnG+FdnH.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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