exbD:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''exbD''  
''exbD''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2998, b3005, JW2973''<ref name='LIB:Riley_2006'/>
''ECK2998, b3005, JW2973''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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ExbD uptake of enterochelin; tonB-dependent uptake of B colicins<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
ExbD uptake of enterochelin; tonB-dependent uptake of B colicins<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Uptake of enterochelin; resistance or sensitivity to colicins; similarity with TolR<ref name='LIB:EcoGene'/>
Uptake of enterochelin; resistance or sensitivity to colicins; similarity with TolR<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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membrane spanning protein in TonB-ExbB-ExbD complex<ref name='LIB:Riley_2006'/>, B3005<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExbD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
membrane spanning protein in TonB-ExbB-ExbD complex<ref name='LIB:Riley_2006'/>, B3005<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExbD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:exbD|exbD]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:exbBD|exbBD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:exbD|exbD]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:exbBD|exbBD]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=exbD&loc=MG1655:3149265..3148840,W3110:3149899..3149474,DH10B:3247010..3246585,REL606:3085415..3084990 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3085415&end=3084990&gene=exbD&aa=mamhlnenlddngemhdinvtpfidvmlvlliifmvaaplatvdvkvnlpaststpqprpekpvylsvkadnsmfigndpvtdetmitalnaltegkkdttiffradktvdyetlmkvmdtlhqagylkiglvgeetakak Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=exbD+AND+escherichia+coli Pubmed(exbD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=exbD Textpresso(exbD)]


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Revision as of 00:01, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

exbD

Gene Synonym(s)

ECK2998, b3005, JW2973[1]

Product Desc.

ExbD uptake of enterochelin; tonB-dependent uptake of B colicins[2][3];

Component of TonB energy transducing system[3]; Outer Membrane Ferric Citrate Transport System[3]; Outer Membrane Ferrichrome Transport System[3]; Outer Membrane Ferric Enterobactin Transport System[3]; vitamin B12 outer membrane transport complex[3]; ferric dicitrate uptake system[3]; ferrichrome uptake system[3]; Ferric Enterobactin Transport System[3]; vitamin B12 transport system[3]

Uptake of enterochelin; resistance or sensitivity to colicins; similarity with TolR[4]

Product Synonyms(s)

membrane spanning protein in TonB-ExbB-ExbD complex[1], B3005[2][1], ExbD[2][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): exbD[2], exbBD[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(exbD)    Textpresso(exbD)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.