ebgC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ebgC'' | ''ebgC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3067, b3077, JW3048''<ref name='LIB:Riley_2006'/> | ''ECK3067, b3077, JW3048''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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evolved β-D-galactosidase, β subunit; cryptic gene<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | evolved β-D-galactosidase, β subunit; cryptic gene<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Evolved beta-galactosidase, beta subunit; normal substrate and function unknown; alpha(4)beta(4) holoenzyme<ref name='LIB:EcoGene'/> | Evolved beta-galactosidase, beta subunit; normal substrate and function unknown; alpha(4)beta(4) holoenzyme<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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cryptic beta-D-galactosidase, beta subunit<ref name='LIB:Riley_2006'/>, B3077<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EbgC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | cryptic beta-D-galactosidase, beta subunit<ref name='LIB:Riley_2006'/>, B3077<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EbgC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ebgAC|ebgAC]]<ref name='LIB:EcoCyc10.6'/>, OP00170 | transcription unit(s): [[:Category:Txn_unit:ebgAC|ebgAC]]<ref name='LIB:EcoCyc10.6'/>, OP00170 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ebgC&loc=MG1655:3223744..3224193,W3110:3224378..3224827,REL606:3158539..3158988,DH10B:3321489..3321938 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3321489&end=3321938&gene=ebgC&aa=mriidnleqfrqiyasgkkwqrcveaienidniqpgvahsigdsltyrvetdsatdalftghrryfevhyylqgqqkieyapketlqvveyyrdetdreylkgcgetvevhegqivicdiheayrficnnavkkvvlkvtiedgyfhnk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ebgC+AND+escherichia+coli Pubmed(ebgC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ebgC Textpresso(ebgC)] | |||
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Revision as of 00:02, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ebgC |
|---|---|
| Gene Synonym(s) |
ECK3067, b3077, JW3048[1] |
| Product Desc. |
evolved β-D-galactosidase, β subunit; cryptic gene[2][3]; Component of evolved β-D-galactosidase[3] Evolved beta-galactosidase, beta subunit; normal substrate and function unknown; alpha(4)beta(4) holoenzyme[4] |
| Product Synonyms(s) |
cryptic beta-D-galactosidase, beta subunit[1], B3077[2][1], EbgC[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
EbgC is required for full activity: it has been suggested to be involved in the rate-limiting degalactosylation step and/or in electrophilic catalysis by the EbgA active site Mg(2+). EbgC is a distant homolog of YiaL, YhcH and YjgK; all four match pfam PF04074.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.