dppB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''dppB'' | ''dppB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3530, b3543, JW3512''<ref name='LIB:Riley_2006'/> | ''ECK3530, b3543, JW3512''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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DppB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | DppB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Dipeptide/heme transport, permease; also transports 5-aminolevulinic acid<ref name='LIB:EcoGene'/> | Dipeptide/heme transport, permease; also transports 5-aminolevulinic acid<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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dipeptide transporter<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B3543<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DppB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | dipeptide transporter<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B3543<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DppB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006857 oligopeptide transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0042938 dipeptide transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
'''Molecular Function''' | |||
* GO:0015198 oligopeptide transporter activity ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0015421 oligopeptide-transporting ATPase activity ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
* GO:0042936 dipeptide transporter activity ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
'''Cellular Component''' | |||
* GO:0016021 integral to membrane ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
* GO:0043190 ATP-binding cassette (ABC) transporter complex ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:dppABCDF|dppABCDF]]<ref name='LIB:EcoCyc10.6'/>, dpp, dppABCDE | transcription unit(s): [[:Category:Txn_unit:dppABCDF|dppABCDF]]<ref name='LIB:EcoCyc10.6'/>, dpp, dppABCDE | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=dppB&loc=MG1655:3703813..3702794,W3110:3934625..3935644,DH10B:3801558..3800539,REL606:3636248..3635229 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3636248&end=3635229&gene=dppB&aa=mlqfilrrlglviptfigitlltfafvhmipgdpvmimagergisperhaqllaelgldkpmwqqylhyiwgvmhgdlgismksripvweefvprfqatlelgvcamifatavgipvgvlaavkrgsifdhtavglaltgysmpifwwgmmlimlvsvhwnltpvsgrvsdmvflddsnpltgfmlidtaiwgedgnfidavahmilpaivlgtiplavivrmtrssmlevlgedyirtarakgltrmrviivhalrnamlpvvtviglqvgtllagailtetifswpglgrwlidalqrrdypvvqggvllvatmiilvnllvdllygvvnprirhkk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dppB+AND+escherichia+coli Pubmed(dppB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dppB Textpresso(dppB)] | |||
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Revision as of 00:03, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
dppB |
|---|---|
| Gene Synonym(s) |
ECK3530, b3543, JW3512[1] |
| Product Desc. |
Component of dipeptide ABC transporter[2][3] Dipeptide/heme transport, permease; also transports 5-aminolevulinic acid[4] |
| Product Synonyms(s) |
dipeptide transporter[1], membrane component of ABC superfamily[1], B3543[2][1], DppB[2][1] |
| Function from GO |
Biological Process
Molecular Function
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
E. coli does not normally use exogeneous heme, but heme can be utilized if a foreign OM heme receptor is expressed in E. coli (Letoffe, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Categories:
- GO:0006857 ! oligopeptide transport
- GO:0042938 ! dipeptide transport
- GO:0015198 ! oligopeptide transporter activity
- GO:0015421 ! ATPase-coupled oligopeptide transmembrane transporter activity
- GO:0042936 ! dipeptide transporter activity
- GO:0016021 ! integral component of membrane
- GO:0043190 ! ATP-binding cassette (ABC) transporter complex