dmsB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''dmsB''  
''dmsB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0886, b0895, JW0878''<ref name='LIB:Riley_2006'/>
''ECK0886, b0895, JW0878''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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dimethyl sulfoxide reductase, chain B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
dimethyl sulfoxide reductase, chain B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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DMSO reductase subunit B; apparent Fe-S binding subunit; anaerobic<ref name='LIB:EcoGene'/>
DMSO reductase subunit B; apparent Fe-S binding subunit; anaerobic<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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dimethyl sulfoxide reductase, anaerobic, subunit B<ref name='LIB:Riley_2006'/>, B0895<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DmsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
dimethyl sulfoxide reductase, anaerobic, subunit B<ref name='LIB:Riley_2006'/>, B0895<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DmsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005506 iron ion binding ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0051539 4 iron, 4 sulfur cluster binding ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Biological Process'''
* GO:0009061 anaerobic respiration ([http://www.geneontology.org/GO.evidence.shtml IEP])
'''Cellular Component'''
* GO:0009390 dimethyl sulfoxide reductase complex ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:dmsABC|dmsABC]]<ref name='LIB:EcoCyc10.6'/>, OP00026, dms  
transcription unit(s): [[:Category:Txn_unit:dmsABC|dmsABC]]<ref name='LIB:EcoCyc10.6'/>, OP00026, dms  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=dmsB&loc=MG1655:942637..943254,W3110:943836..944453,DH10B:996565..997182,REL606:960507..961124 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=960507&end=961124&gene=dmsB&aa=mttqygffidssrctgcktcelackdykdltpevsfrriyeyaggdwqedngvwhqnvfayylsiscnhcedpactkvcpsgamhkredgfvvvdedvcigcrychmacpygapqynetkghmtkcdgcydrvaegkkpicvescplraldfgpidelrkkhgdlaavaplprahftkpnivikpnansrptgdttgylanpkev Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dmsB+AND+escherichia+coli Pubmed(dmsB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dmsB Textpresso(dmsB)]


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Revision as of 00:03, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

dmsB

Gene Synonym(s)

ECK0886, b0895, JW0878[1]

Product Desc.

dimethyl sulfoxide reductase, chain B[2][3];

Component of dimethyl sulfoxide reductase[2][3]

DMSO reductase subunit B; apparent Fe-S binding subunit; anaerobic[4]

Product Synonyms(s)

dimethyl sulfoxide reductase, anaerobic, subunit B[1], B0895[2][1], DmsB[2][1]

Function from GO

Molecular Function

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dmsABC[2], OP00026, dms

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(dmsB)    Textpresso(dmsB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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DmsB is co-exported bound to Tat substrate DmsA.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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