dcuR:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''dcuR''  
''dcuR''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4117, b4124, JW4085, yjdG''<ref name='LIB:Riley_2006'/>
''ECK4117, b4124, JW4085, yjdG''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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DNA-binding response regulator in two-component regulatory system with DcuS product<ref name='LIB:Riley_2006'/>
DNA-binding response regulator in two-component regulatory system with DcuS product<ref name='LIB:Riley_2006'/>
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C4-dicarboxylate regulation of anaerobic fumurate respiratory system; two-component system response regulator<ref name='LIB:EcoGene'/>
C4-dicarboxylate regulation of anaerobic fumurate respiratory system; two-component system response regulator<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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B4124<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjdG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
B4124<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjdG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IEP,IGI])
'''Molecular Function'''
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IEP,IGI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:dcuSR|dcuSR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:dcuSR|dcuSR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=dcuR&loc=MG1655:4348057..4347338,W3110:4354712..4353993,REL606:4328749..4328030 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4328749&end=4328030&gene=dcuR&aa=minvliidddamvaelnrryvaqipgfqccgtastlekakeiifnsdtpidlilldiymqkengldllpvlhnarcksdvivissaadaatikdslhygvvdylikpfqasrfeealtgwrqkkmalekhqyydqaeldqlihgsssneqdprrlpkgltpqtlrtlcqwidahqdyefstdelanevnisrvscrkyliwlvnchilftsihygvtgrpvyryriqaehysllkqycq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dcuR+AND+escherichia+coli Pubmed(dcuR)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dcuR Textpresso(dcuR)]


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Revision as of 00:04, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

dcuR

Gene Synonym(s)

ECK4117, b4124, JW4085, yjdG[1]

Product Desc.

DNA-binding response regulator in two-component regulatory system with DcuS product[1]

C4-dicarboxylate regulation of anaerobic fumurate respiratory system; two-component system response regulator[2]

Product Synonyms(s)

B4124[3][1], YjdG[3][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dcuSR[3]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(dcuR)    Textpresso(dcuR)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


dcuSR operon is repressed by nitrate via the NarXL system.[2]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7